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YPT7_YEAST
ID   YPT7_YEAST              Reviewed;         208 AA.
AC   P32939; D6VZH4;
DT   01-OCT-1993, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1993, sequence version 1.
DT   03-AUG-2022, entry version 203.
DE   RecName: Full=Ypt/Rab-type GTPase YPT7;
DE   AltName: Full=Vacuolar morphology protein 4 {ECO:0000303|PubMed:1526998};
GN   Name=YPT7; Synonyms=VAM4 {ECO:0000303|PubMed:1526998};
GN   OrderedLocusNames=YML001W {ECO:0000312|SGD:S000004460}; ORFNames=YM8270.02;
OS   Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=559292;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=1473149; DOI=10.1016/s0092-8674(05)80062-5;
RA   Wichmann H., Hengst L., Gallwitz D.;
RT   "Endocytosis in yeast: evidence for the involvement of a small GTP-binding
RT   protein (Ypt7p).";
RL   Cell 71:1131-1142(1992).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND MUTAGENESIS OF THR-22 AND GLN-68.
RC   STRAIN=ATCC 26786 / X2180-1A;
RX   DOI=10.1007/BF01281810;
RA   Wada Y., Ohsumi Y., Kawai A., Ohsumi M.;
RT   "Mutational analysis of Vam4/Ypt7p function in the vacuolar biogenesis and
RT   morphogenesis in the yeast, Saccharomyces cerevisiae.";
RL   Protoplasma 191:126-135(1996).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=9169872;
RA   Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T.,
RA   Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K.,
RA   Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P.,
RA   Skelton J., Walsh S.V., Whitehead S., Barrell B.G.;
RT   "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.";
RL   Nature 387:90-93(1997).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC 204508 / S288c;
RX   PubMed=24374639; DOI=10.1534/g3.113.008995;
RA   Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R.,
RA   Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S.,
RA   Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.;
RT   "The reference genome sequence of Saccharomyces cerevisiae: Then and now.";
RL   G3 (Bethesda) 4:389-398(2014).
RN   [5]
RP   GENE FAMILY.
RX   PubMed=1526998; DOI=10.1016/s0021-9258(19)37012-7;
RA   Wada Y., Ohsumi Y., Anraku Y.;
RT   "Genes for directing vacuolar morphogenesis in Saccharomyces cerevisiae. I.
RT   Isolation and characterization of two classes of vam mutants.";
RL   J. Biol. Chem. 267:18665-18670(1992).
RN   [6]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=8308065; DOI=10.1242/jcs.106.3.823;
RA   Schimmoeller F., Riezman H.;
RT   "Involvement of Ypt7p, a small GTPase, in traffic from late endosome to the
RT   vacuole in yeast.";
RL   J. Cell Sci. 106:823-830(1993).
RN   [7]
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=7489715; DOI=10.1002/j.1460-2075.1995.tb00210.x;
RA   Haas A., Schegelmann D., Lazar T., Gallwitz D., Wickner W.;
RT   "The GTPase Ypt7p of Saccharomyces cerevisiae is required on both partner
RT   vacuoles for the homotypic fusion step of vacuole inheritance.";
RL   EMBO J. 14:5258-5270(1995).
RN   [8]
RP   FUNCTION.
RX   PubMed=11118206; DOI=10.1093/emboj/19.24.6713;
RA   Eitzen G., Will E., Gallwitz D., Haas A., Wickner W.;
RT   "Sequential action of two GTPases to promote vacuole docking and fusion.";
RL   EMBO J. 19:6713-6720(2000).
RN   [9]
RP   FUNCTION.
RX   PubMed=10725336; DOI=10.1083/jcb.148.6.1231;
RA   Price A., Seals D., Wickner W., Ungermann C.;
RT   "The docking stage of yeast vacuole fusion requires the transfer of
RT   proteins from a cis-SNARE complex to a Rab/Ypt protein.";
RL   J. Cell Biol. 148:1231-1238(2000).
RN   [10]
RP   FUNCTION, AND ACTIVITY REGULATION.
RX   PubMed=11062257; DOI=10.1083/jcb.151.3.551;
RA   Wurmser A.E., Sato T.K., Emr S.D.;
RT   "New component of the vacuolar class C-Vps complex couples nucleotide
RT   exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion.";
RL   J. Cell Biol. 151:551-562(2000).
RN   [11]
RP   FUNCTION.
RX   PubMed=10944212; DOI=10.1073/pnas.97.17.9402;
RA   Seals D.F., Eitzen G., Margolis N., Wickner W.T., Price A.;
RT   "A Ypt/Rab effector complex containing the Sec1 homolog Vps33p is required
RT   for homotypic vacuole fusion.";
RL   Proc. Natl. Acad. Sci. U.S.A. 97:9402-9407(2000).
RN   [12]
RP   FUNCTION.
RX   PubMed=11210571; DOI=10.1016/s0076-6879(01)29065-x;
RA   Will E., Albert S., Gallwitz D.;
RT   "Expression, purification, and biochemical properties of Ypt/Rab GTPase-
RT   activating proteins of Gyp family.";
RL   Methods Enzymol. 329:50-58(2001).
RN   [13]
RP   INTERACTION WITH GDI1.
RX   PubMed=11785952; DOI=10.1006/bbrc.2001.6242;
RA   Calero M., Collins R.N.;
RT   "Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab
RT   proteins.";
RL   Biochem. Biophys. Res. Commun. 290:676-681(2002).
RN   [14]
RP   INTERACTION WITH IVY1.
RX   PubMed=12553664; DOI=10.1078/0171-9335-00290;
RA   Lazar T., Scheglmann D., Gallwitz D.;
RT   "A novel phospholipid-binding protein from the yeast Saccharomyces
RT   cerevisiae with dual binding specificities for the transport GTPase Ypt7p
RT   and the Sec1-related Vps33p.";
RL   Eur. J. Cell Biol. 81:635-646(2002).
RN   [15]
RP   INTERACTION WITH YIF1; YIP4 AND YIP5.
RX   PubMed=11943201; DOI=10.1016/s0014-5793(02)02442-0;
RA   Calero M., Winand N.J., Collins R.N.;
RT   "Identification of the novel proteins Yip4p and Yip5p as Rab GTPase
RT   interacting factors.";
RL   FEBS Lett. 515:89-98(2002).
RN   [16]
RP   LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
RX   PubMed=14562106; DOI=10.1038/nature02046;
RA   Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N.,
RA   O'Shea E.K., Weissman J.S.;
RT   "Global analysis of protein expression in yeast.";
RL   Nature 425:737-741(2003).
RN   [17]
RP   FUNCTION.
RX   PubMed=19386605; DOI=10.1074/jbc.m109.000737;
RA   Hickey C.M., Stroupe C., Wickner W.;
RT   "The major role of the Rab Ypt7p in vacuole fusion is supporting HOPS
RT   membrane association.";
RL   J. Biol. Chem. 284:16118-16125(2009).
RN   [18]
RP   ACTIVITY REGULATION.
RX   PubMed=20797862; DOI=10.1016/j.cub.2010.08.002;
RA   Nordmann M., Cabrera M., Perz A., Broecker C., Ostrowicz C.,
RA   Engelbrecht-Vandre S., Ungermann C.;
RT   "The Mon1-Ccz1 complex is the GEF of the late endosomal Rab7 homolog
RT   Ypt7.";
RL   Curr. Biol. 20:1654-1659(2010).
RN   [19]
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=21062894; DOI=10.1242/jcs.071977;
RA   Balderhaar H.J., Arlt H., Ostrowicz C., Broecker C., Suendermann F.,
RA   Brandt R., Babst M., Ungermann C.;
RT   "The Rab GTPase Ypt7 is linked to retromer-mediated receptor recycling and
RT   fusion at the yeast late endosome.";
RL   J. Cell Sci. 123:4085-4094(2010).
RN   [20]
RP   FUNCTION, AND SUBCELLULAR LOCATION.
RX   PubMed=22593205; DOI=10.1091/mbc.e11-11-0915;
RA   Liu T.T., Gomez T.S., Sackey B.K., Billadeau D.D., Burd C.G.;
RT   "Rab GTPase regulation of retromer-mediated cargo export during endosome
RT   maturation.";
RL   Mol. Biol. Cell 23:2505-2515(2012).
RN   [21]
RP   UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-147, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=22106047; DOI=10.1002/pmic.201100166;
RA   Starita L.M., Lo R.S., Eng J.K., von Haller P.D., Fields S.;
RT   "Sites of ubiquitin attachment in Saccharomyces cerevisiae.";
RL   Proteomics 12:236-240(2012).
RN   [22]
RP   SUBCELLULAR LOCATION, AND INTERACTION WITH VPS39.
RX   PubMed=25026035; DOI=10.1016/j.devcel.2014.06.006;
RA   Hoenscher C., Mari M., Auffarth K., Bohnert M., Griffith J., Geerts W.,
RA   van der Laan M., Cabrera M., Reggiori F., Ungermann C.;
RT   "Cellular metabolism regulates contact sites between vacuoles and
RT   mitochondria.";
RL   Dev. Cell 30:86-94(2014).
RN   [23]
RP   X-RAY CRYSTALLOGRAPHY (1.35 ANGSTROMS) OF 1-182 IN COMPLEX WITH GTP.
RX   PubMed=11937061; DOI=10.1016/s0969-2126(02)00737-2;
RA   Constantinescu A.T., Rak A., Alexandrov K., Esters H., Goody R.S.,
RA   Scheidig A.J.;
RT   "Rab-subfamily-specific regions of Ypt7p are structurally different from
RT   other RabGTPases.";
RL   Structure 10:569-579(2002).
RN   [24]
RP   X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 1-182 IN COMPLEX WITH GTP.
RX   PubMed=26178622; DOI=10.1038/ncomms8773;
RA   Wiegandt D., Vieweg S., Hofmann F., Koch D., Li F., Wu Y.W., Itzen A.,
RA   Mueller M.P., Goody R.S.;
RT   "Locking GTPases covalently in their functional states.";
RL   Nat. Commun. 6:7773-7773(2015).
CC   -!- FUNCTION: Ypt/Rab-type GTPases are key regulators of membrane
CC       trafficking and intracellular vesicular transport. They act as
CC       molecular switches that convert between GTP-bound and GDP-bound states,
CC       and regulate virtually all steps of membrane traffic from the formation
CC       of the transport vesicle at the donor membrane to its fusion at the
CC       target membrane. In the GDP-bound state, Ypt proteins are predominantly
CC       cytosolic, solubilized through the interaction with a GDP dissociation
CC       inhibitor (GDI). In the GTP-bound state, the proteins are membrane
CC       bound and interact with specific effector proteins that select cargo,
CC       promote vesicle movement, or verify the correct site of fusion
CC       (Probable). YPT7 is involved in regulation of vesicular protein
CC       transport in exo- and endocytosis (PubMed:8308065). Involved in
CC       homotypic vacuole fusion, the last step in the vacuole inheritance
CC       process, by interacting in its GTP-bound state on the donor membrane
CC       with the large multiprotein tethering complex termed HOPS on the
CC       acceptor membrane (PubMed:7489715, PubMed:11118206, PubMed:10725336,
CC       PubMed:10944212, PubMed:11210571, PubMed:19386605). Involved in the
CC       regulation of transport steps from late endosomes to the vacuole,
CC       mediated by interaction in its GTP-bound state on the donor membrane
CC       with the large multiprotein tethering complex termed class C-Vps
CC       complex on the acceptor membrane (PubMed:8308065, PubMed:11062257,
CC       PubMed:21062894). Involved in retromer assembly and cargo export,
CC       recognizing the cargo selection complex (CSC). GTP-bound YPT7 recruits
CC       CSC to vacuolar membranes via retromer subunit VPS35 (PubMed:22593205).
CC       Interacts with the HOPS complex subunit VPS39 independent of the HOPS
CC       complex at mitochondria-vacuole contact sites (vCLAMPs), providing a
CC       physical and metabolic interconnection between the endocytic pathway
CC       and mitochondria (PubMed:25026035). {ECO:0000269|PubMed:10725336,
CC       ECO:0000269|PubMed:10944212, ECO:0000269|PubMed:11062257,
CC       ECO:0000269|PubMed:11118206, ECO:0000269|PubMed:11210571,
CC       ECO:0000269|PubMed:19386605, ECO:0000269|PubMed:21062894,
CC       ECO:0000269|PubMed:22593205, ECO:0000269|PubMed:25026035,
CC       ECO:0000269|PubMed:7489715, ECO:0000269|PubMed:8308065, ECO:0000305}.
CC   -!- ACTIVITY REGULATION: Rab activation is generally mediated by a guanine
CC       exchange factor (GEF), while inactivation through hydrolysis of bound
CC       GTP is catalyzed by a GTPase activating protein (GAP). YPT7 is
CC       activated by GEFs MON1-CCZ1 complex (MC1) and VAM6/VPS39, and
CC       inactivated by GAPs GYP7 and GYP1. {ECO:0000269|PubMed:11062257,
CC       ECO:0000269|PubMed:11210571, ECO:0000269|PubMed:19386605,
CC       ECO:0000269|PubMed:20797862, ECO:0000269|PubMed:22593205}.
CC   -!- SUBUNIT: Interacts with IVY1 (PubMed:12553664). Interacts with YIF1,
CC       YIP4 and YIP5 (PubMed:11943201). Interacts with the HOPS complex
CC       (PubMed:10944212, PubMed:19386605). Interacts with the class C-Vps
CC       complex (PubMed:11062257). Interacts with VPS35 (PubMed:22593205).
CC       Interacts with VPS39 (PubMed:25026035). Interacts with the GDP
CC       dissociation inhibitor GDI1 (PubMed:11118206, PubMed:11785952).
CC       {ECO:0000269|PubMed:10944212, ECO:0000269|PubMed:11062257,
CC       ECO:0000269|PubMed:11118206, ECO:0000269|PubMed:11785952,
CC       ECO:0000269|PubMed:11943201, ECO:0000269|PubMed:12553664,
CC       ECO:0000269|PubMed:19386605, ECO:0000269|PubMed:22593205,
CC       ECO:0000269|PubMed:25026035}.
CC   -!- INTERACTION:
CC       P32939; P39958: GDI1; NbExp=3; IntAct=EBI-29509, EBI-7517;
CC       P32939; Q04934: IVY1; NbExp=3; IntAct=EBI-29509, EBI-35255;
CC       P32939; P53845: YIF1; NbExp=2; IntAct=EBI-29509, EBI-28230;
CC       P32939; P53093: YIP4; NbExp=2; IntAct=EBI-29509, EBI-24124;
CC   -!- SUBCELLULAR LOCATION: Late endosome {ECO:0000269|PubMed:21062894}.
CC       Vacuole membrane {ECO:0000269|PubMed:22593205,
CC       ECO:0000269|PubMed:7489715}. Note=Localizes to sites of contact between
CC       the vacuole and mitochondria (vCLAMPs). {ECO:0000269|PubMed:25026035}.
CC   -!- DISRUPTION PHENOTYPE: Endocytosed alpha-factor accumulates in late
CC       endosomes. {ECO:0000269|PubMed:8308065}.
CC   -!- MISCELLANEOUS: Present with 5530 molecules/cell in log phase SD medium.
CC       {ECO:0000269|PubMed:14562106}.
CC   -!- SIMILARITY: Belongs to the small GTPase superfamily. Rab family.
CC       {ECO:0000305}.
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DR   EMBL; X68144; CAA48244.1; -; Genomic_DNA.
DR   EMBL; D64114; BAA10973.1; -; Genomic_DNA.
DR   EMBL; Z48613; CAA88515.1; -; Genomic_DNA.
DR   EMBL; BK006946; DAA09898.1; -; Genomic_DNA.
DR   PIR; A44334; A44334.
DR   RefSeq; NP_013713.1; NM_001182356.1.
DR   PDB; 1KY2; X-ray; 1.60 A; A=1-182.
DR   PDB; 1KY3; X-ray; 1.35 A; A=1-182.
DR   PDB; 4PHF; X-ray; 1.95 A; A=1-182.
DR   PDB; 4PHG; X-ray; 1.90 A; A=1-182.
DR   PDB; 4PHH; X-ray; 2.35 A; A/B/C/D=1-182.
DR   PDBsum; 1KY2; -.
DR   PDBsum; 1KY3; -.
DR   PDBsum; 4PHF; -.
DR   PDBsum; 4PHG; -.
DR   PDBsum; 4PHH; -.
DR   AlphaFoldDB; P32939; -.
DR   SMR; P32939; -.
DR   BioGRID; 35170; 488.
DR   DIP; DIP-1735N; -.
DR   IntAct; P32939; 19.
DR   MINT; P32939; -.
DR   STRING; 4932.YML001W; -.
DR   TCDB; 9.A.63.1.1; the retromer-dependent vacuolar protein sorting (r-vps) family.
DR   iPTMnet; P32939; -.
DR   MaxQB; P32939; -.
DR   PaxDb; P32939; -.
DR   PRIDE; P32939; -.
DR   TopDownProteomics; P32939; -.
DR   EnsemblFungi; YML001W_mRNA; YML001W; YML001W.
DR   GeneID; 855012; -.
DR   KEGG; sce:YML001W; -.
DR   SGD; S000004460; YPT7.
DR   VEuPathDB; FungiDB:YML001W; -.
DR   eggNOG; KOG0394; Eukaryota.
DR   GeneTree; ENSGT00940000166196; -.
DR   HOGENOM; CLU_041217_10_6_1; -.
DR   InParanoid; P32939; -.
DR   OMA; IQACPRD; -.
DR   BioCyc; YEAST:G3O-32607-MON; -.
DR   Reactome; R-SCE-6798695; Neutrophil degranulation.
DR   Reactome; R-SCE-8854214; TBC/RABGAPs.
DR   Reactome; R-SCE-8873719; RAB geranylgeranylation.
DR   Reactome; R-SCE-8876198; RAB GEFs exchange GTP for GDP on RABs.
DR   Reactome; R-SCE-9013405; RHOD GTPase cycle.
DR   EvolutionaryTrace; P32939; -.
DR   PRO; PR:P32939; -.
DR   Proteomes; UP000002311; Chromosome XIII.
DR   RNAct; P32939; protein.
DR   GO; GO:0005829; C:cytosol; IEA:GOC.
DR   GO; GO:0000324; C:fungal-type vacuole; IDA:SGD.
DR   GO; GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.
DR   GO; GO:0005770; C:late endosome; IBA:GO_Central.
DR   GO; GO:0005741; C:mitochondrial outer membrane; HDA:SGD.
DR   GO; GO:0005739; C:mitochondrion; HDA:SGD.
DR   GO; GO:0045335; C:phagocytic vesicle; IBA:GO_Central.
DR   GO; GO:0005773; C:vacuole; IBA:GO_Central.
DR   GO; GO:1990816; C:vacuole-mitochondrion membrane contact site; IDA:SGD.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003924; F:GTPase activity; IDA:SGD.
DR   GO; GO:0044877; F:protein-containing complex binding; IDA:SGD.
DR   GO; GO:0032258; P:cytoplasm to vacuole transport by the Cvt pathway; IMP:SGD.
DR   GO; GO:0006897; P:endocytosis; IMP:SGD.
DR   GO; GO:0016236; P:macroautophagy; IMP:SGD.
DR   GO; GO:0034727; P:piecemeal microautophagy of the nucleus; IMP:SGD.
DR   GO; GO:0072665; P:protein localization to vacuole; IMP:SGD.
DR   GO; GO:0043254; P:regulation of protein-containing complex assembly; IDA:SGD.
DR   GO; GO:0032889; P:regulation of vacuole fusion, non-autophagic; IMP:SGD.
DR   GO; GO:0042147; P:retrograde transport, endosome to Golgi; IPI:SGD.
DR   GO; GO:0000011; P:vacuole inheritance; IDA:SGD.
DR   GO; GO:0016192; P:vesicle-mediated transport; IDA:SGD.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR005225; Small_GTP-bd_dom.
DR   InterPro; IPR001806; Small_GTPase.
DR   Pfam; PF00071; Ras; 1.
DR   SMART; SM00174; RHO; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR00231; small_GTP; 1.
DR   PROSITE; PS51419; RAB; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Endosome; GTP-binding; Isopeptide bond; Lipoprotein;
KW   Membrane; Methylation; Nucleotide-binding; Prenylation; Protein transport;
KW   Reference proteome; Transport; Ubl conjugation; Vacuole.
FT   CHAIN           1..208
FT                   /note="Ypt/Rab-type GTPase YPT7"
FT                   /id="PRO_0000121320"
FT   MOTIF           37..45
FT                   /note="Effector region"
FT                   /evidence="ECO:0000305"
FT   BINDING         17..23
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0007744|PDB:1KY2, ECO:0007744|PDB:1KY3,
FT                   ECO:0007744|PDB:4PHF, ECO:0007744|PDB:4PHG"
FT   BINDING         33..40
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0007744|PDB:1KY2, ECO:0007744|PDB:1KY3,
FT                   ECO:0007744|PDB:4PHF, ECO:0007744|PDB:4PHG"
FT   BINDING         67
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0007744|PDB:1KY2, ECO:0007744|PDB:4PHG"
FT   BINDING         126..129
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0007744|PDB:1KY2, ECO:0007744|PDB:1KY3,
FT                   ECO:0007744|PDB:4PHF, ECO:0007744|PDB:4PHG"
FT   BINDING         158..160
FT                   /ligand="GTP"
FT                   /ligand_id="ChEBI:CHEBI:37565"
FT                   /evidence="ECO:0007744|PDB:1KY2, ECO:0007744|PDB:1KY3,
FT                   ECO:0007744|PDB:4PHF, ECO:0007744|PDB:4PHG"
FT   MOD_RES         208
FT                   /note="Cysteine methyl ester"
FT                   /evidence="ECO:0000250|UniProtKB:P36586"
FT   LIPID           206
FT                   /note="S-geranylgeranyl cysteine"
FT                   /evidence="ECO:0000250|UniProtKB:P36586"
FT   LIPID           208
FT                   /note="S-geranylgeranyl cysteine"
FT                   /evidence="ECO:0000250|UniProtKB:P36586"
FT   CROSSLNK        147
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0007744|PubMed:22106047"
FT   MUTAGEN         22
FT                   /note="T->N: Constitutively in the GDP-bound conformation.
FT                   Causes loss of function during vacuolar morphogenesis."
FT                   /evidence="ECO:0000269|Ref.2"
FT   MUTAGEN         68
FT                   /note="Q->L: Constitutively in the GTP-bound conformation.
FT                   Complements the fragmented vacuolar morphology of ypt7 null
FT                   mutant cells."
FT                   /evidence="ECO:0000269|Ref.2"
FT   STRAND          8..14
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           21..30
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   STRAND          46..50
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   STRAND          53..55
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   STRAND          58..63
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           69..71
FT                   /evidence="ECO:0007829|PDB:1KY2"
FT   TURN            73..76
FT                   /evidence="ECO:0007829|PDB:1KY2"
FT   HELIX           77..79
FT                   /evidence="ECO:0007829|PDB:1KY2"
FT   STRAND          84..90
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           94..98
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           100..111
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   TURN            116..118
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   STRAND          121..126
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           132..134
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           139..148
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   STRAND          154..158
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   TURN            159..162
FT                   /evidence="ECO:0007829|PDB:1KY3"
FT   HELIX           165..180
FT                   /evidence="ECO:0007829|PDB:1KY3"
SQ   SEQUENCE   208 AA;  23043 MW;  0E2B72BDA7F7CEE5 CRC64;
     MSSRKKNILK VIILGDSGVG KTSLMHRYVN DKYSQQYKAT IGADFLTKEV TVDGDKVATM
     QVWDTAGQER FQSLGVAFYR GADCCVLVYD VTNASSFENI KSWRDEFLVH ANVNSPETFP
     FVILGNKIDA EESKKIVSEK SAQELAKSLG DIPLFLTSAK NAINVDTAFE EIARSALQQN
     QADTEAFEDD YNDAINIRLD GENNSCSC
 
 
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