YQFA_ECOLI
ID YQFA_ECOLI Reviewed; 219 AA.
AC P67153; Q2M9U2; Q46827;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=UPF0073 inner membrane protein YqfA;
GN Name=yqfA; OrderedLocusNames=b2899, JW2867;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the UPF0073 (Hly-III) family. {ECO:0000305}.
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DR EMBL; U28375; AAA83080.1; -; Genomic_DNA.
DR EMBL; U00096; AAC75937.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76964.1; -; Genomic_DNA.
DR PIR; C65074; C65074.
DR RefSeq; NP_417375.1; NC_000913.3.
DR RefSeq; WP_000250274.1; NZ_STEB01000001.1.
DR AlphaFoldDB; P67153; -.
DR SMR; P67153; -.
DR BioGRID; 4261705; 10.
DR STRING; 511145.b2899; -.
DR TCDB; 1.C.113.1.10; the hemolysin iii (hly iii) family.
DR PaxDb; P67153; -.
DR EnsemblBacteria; AAC75937; AAC75937; b2899.
DR EnsemblBacteria; BAE76964; BAE76964; BAE76964.
DR GeneID; 66673227; -.
DR GeneID; 947381; -.
DR KEGG; ecj:JW2867; -.
DR KEGG; eco:b2899; -.
DR PATRIC; fig|1411691.4.peg.3833; -.
DR EchoBASE; EB2887; -.
DR eggNOG; COG1272; Bacteria.
DR HOGENOM; CLU_051078_1_0_6; -.
DR InParanoid; P67153; -.
DR OMA; HEVFHSL; -.
DR PhylomeDB; P67153; -.
DR BioCyc; EcoCyc:G7512-MON; -.
DR PRO; PR:P67153; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR GO; GO:0019835; P:cytolysis; IEA:InterPro.
DR InterPro; IPR004254; AdipoR/HlyIII-related.
DR InterPro; IPR005744; Hy-lIII.
DR PANTHER; PTHR20855; PTHR20855; 1.
DR Pfam; PF03006; HlyIII; 1.
DR TIGRFAMs; TIGR01065; hlyIII; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..219
FT /note="UPF0073 inner membrane protein YqfA"
FT /id="PRO_0000176898"
FT TOPO_DOM 1..23
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 24..44
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 45..53
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 54..74
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 75..90
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 91..111
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 112..113
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 114..134
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 135..138
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 139..159
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 160..165
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 166..186
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 187..195
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 196..216
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 217..219
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 219 AA; 23847 MW; F1D863D2D1A30DA0 CRC64;
MVQKPLIKQG YSLAEEIANS VSHGIGLVFG IVGLVLLLVQ AVDLNASATA ITSYSLYGGS
MILLFLASTL YHAIPHQRAK MWLKKFDHCA IYLLIAGTYT PFLLVGLDSP LARGLMIVIW
SLALLGILFK LTIAHRFKIL SLVTYLAMGW LSLVVIYEMA VKLAAGSVTL LAVGGVVYSL
GVIFYVCKRI PYNHAIWHGF VLGGSVCHFL AIYLYIGQA