ID   YQGF_AMOA5              Reviewed;         141 AA.
AC   B3ETT5;
DT   14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT   22-JUL-2008, sequence version 1.
DT   03-AUG-2022, entry version 78.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN   OrderedLocusNames=Aasi_1327;
OS   Amoebophilus asiaticus (strain 5a2).
OC   Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae;
OC   Candidatus Amoebophilus.
OX   NCBI_TaxID=452471;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=5a2;
RX   PubMed=20023027; DOI=10.1128/jb.01379-09;
RA   Schmitz-Esser S., Tischler P., Arnold R., Montanaro J., Wagner M.,
RA   Rattei T., Horn M.;
RT   "The genome of the amoeba symbiont 'Candidatus Amoebophilus asiaticus'
RT   reveals common mechanisms for host cell interaction among amoeba-associated
RT   bacteria.";
RL   J. Bacteriol. 192:1045-1057(2010).
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
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DR   EMBL; CP001102; ACE06637.1; -; Genomic_DNA.
DR   RefSeq; WP_012473381.1; NC_010830.1.
DR   AlphaFoldDB; B3ETT5; -.
DR   SMR; B3ETT5; -.
DR   STRING; 452471.Aasi_1327; -.
DR   EnsemblBacteria; ACE06637; ACE06637; Aasi_1327.
DR   KEGG; aas:Aasi_1327; -.
DR   eggNOG; COG0816; Bacteria.
DR   HOGENOM; CLU_098240_2_1_10; -.
DR   OMA; VKWDERF; -.
DR   OrthoDB; 2075502at2; -.
DR   Proteomes; UP000001227; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR   CDD; cd16964; YqgF; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..141
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_1000130992"
SQ   SEQUENCE   141 AA;  15996 MW;  EDFDFCF31D1D6978 CRC64;
     MGRIMAIDYG LKRVGLSVTD PLQIIASPLT TVAANDTLTF LQTYVKKENV EAFVVGYPTD
     IKDKNTPIIV AISQFIELLQ RNFPDQQIFQ HDERYTSKLA AASLVEGGFK KKDRRNKENL
     DKLSATIILQ SFLSSYKRHY I