YQGF_AYWBP
ID YQGF_AYWBP Reviewed; 151 AA.
AC Q2NJ58;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 07-FEB-2006, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=AYWB_418;
OS Aster yellows witches'-broom phytoplasma (strain AYWB).
OC Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae;
OC Candidatus Phytoplasma; Candidatus Phytoplasma asteris.
OX NCBI_TaxID=322098;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AYWB;
RX PubMed=16672622; DOI=10.1128/jb.188.10.3682-3696.2006;
RA Bai X., Zhang J., Ewing A., Miller S.A., Jancso Radek A., Shevchenko D.V.,
RA Tsukerman K., Walunas T., Lapidus A., Campbell J.W., Hogenhout S.A.;
RT "Living with genome instability: the adaptation of phytoplasmas to diverse
RT environments of their insect and plant hosts.";
RL J. Bacteriol. 188:3682-3696(2006).
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; CP000061; ABC65535.1; -; Genomic_DNA.
DR RefSeq; WP_011412699.1; NC_007716.1.
DR AlphaFoldDB; Q2NJ58; -.
DR SMR; Q2NJ58; -.
DR STRING; 322098.AYWB_418; -.
DR EnsemblBacteria; ABC65535; ABC65535; AYWB_418.
DR KEGG; ayw:AYWB_418; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_098240_2_0_14; -.
DR OMA; VKWDERF; -.
DR OrthoDB; 2075502at2; -.
DR PhylomeDB; Q2NJ58; -.
DR Proteomes; UP000001934; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT CHAIN 1..151
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_0000257503"
SQ SEQUENCE 151 AA; 17257 MW; CAE8C24D6144894F CRC64;
MLNCQNNASL GLDLGEKTLG IALSQTGIIA QNLKTIFFDT HKYDQLIAPL QKIISQYQIK
KIILGYPKHM NNDIGIKAKI SNYFKKTLEN KFGQVKVILW DERLSTVQAI QILKTNNKKK
GKILQMKDEI AASIILQNYL DYIKLHPNKE N