ID   YQGF_BACTN              Reviewed;         138 AA.
AC   Q8AAP5;
DT   16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT   16-JUN-2003, sequence version 1.
DT   03-AUG-2022, entry version 106.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN   OrderedLocusNames=BT_0419;
OS   Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 /
OS   CCUG 10774 / NCTC 10582 / VPI-5482 / E50).
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
OX   NCBI_TaxID=226186;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 /
RC   VPI-5482 / E50;
RX   PubMed=12663928; DOI=10.1126/science.1080029;
RA   Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C.,
RA   Hooper L.V., Gordon J.I.;
RT   "A genomic view of the human-Bacteroides thetaiotaomicron symbiosis.";
RL   Science 299:2074-2076(2003).
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
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DR   EMBL; AE015928; AAO75526.1; -; Genomic_DNA.
DR   RefSeq; NP_809332.1; NC_004663.1.
DR   RefSeq; WP_008766074.1; NC_004663.1.
DR   AlphaFoldDB; Q8AAP5; -.
DR   SMR; Q8AAP5; -.
DR   STRING; 226186.BT_0419; -.
DR   PaxDb; Q8AAP5; -.
DR   PRIDE; Q8AAP5; -.
DR   EnsemblBacteria; AAO75526; AAO75526; BT_0419.
DR   GeneID; 60926377; -.
DR   KEGG; bth:BT_0419; -.
DR   PATRIC; fig|226186.12.peg.417; -.
DR   eggNOG; COG0816; Bacteria.
DR   HOGENOM; CLU_098240_2_1_10; -.
DR   InParanoid; Q8AAP5; -.
DR   OMA; PMGWTAQ; -.
DR   Proteomes; UP000001414; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IBA:GO_Central.
DR   CDD; cd16964; YqgF; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT   CHAIN           1..138
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_0000172024"
SQ   SEQUENCE   138 AA;  15688 MW;  E552D64E94F6F822 CRC64;
     MSRIVAIDYG RKRTGIAVSD TLQLIANGLT TVPTHELLNF IGGYVAKEPV ERIIIGLPKQ
     MNNEASENMK NIEPFVRSLK KRFPELPVEY VDERFTSVLA HRTMLEAGLK KKDRQNKALV
     DEISATIILQ TYLESKRF