YQGF_BARBK
ID YQGF_BARBK Reviewed; 161 AA.
AC A1UT22;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=BARBAKC583_0838;
OS Bartonella bacilliformis (strain ATCC 35685 / NCTC 12138 / KC583).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bartonellaceae; Bartonella.
OX NCBI_TaxID=360095;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35685 / NCTC 12138 / KC583;
RA Hendrix L., Mohamoud Y., Radune D., Shvartsbeyn A., Daugherty S.,
RA Dodson R., Durkin A.S., Harkins D., Huot H., Kothari S.P., Madupu R.,
RA Li J., Nelson W.C., Shrivastava S., Giglio M.G., Haft D., Selengut J.,
RA Fraser-Ligget C., Seshadri R.;
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; CP000524; ABM45498.1; -; Genomic_DNA.
DR RefSeq; WP_005767188.1; NC_008783.1.
DR AlphaFoldDB; A1UT22; -.
DR SMR; A1UT22; -.
DR STRING; 360095.BARBAKC583_0838; -.
DR EnsemblBacteria; ABM45498; ABM45498; BARBAKC583_0838.
DR KEGG; bbk:BARBAKC583_0838; -.
DR PATRIC; fig|360095.6.peg.813; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_098240_1_1_5; -.
DR OMA; PMGWTAQ; -.
DR OrthoDB; 2075502at2; -.
DR Proteomes; UP000000643; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..161
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_1000061486"
SQ SEQUENCE 161 AA; 17929 MW; 6A469E93A2C49935 CRC64;
MAIITIDRVI SHLLSKQTIA GLDLGTKTIG IAISDISLTF SNPRPVIQRK KFTLDALKLI
KIFDHENVGV AIIGLPINMD GSNGPRVQAT RTFVSNIAMY TKIPFIFWDE RLSTIAAQRH
LLEIDVSRIK RENRIDSAAA AFILQGALDR IQILRQNHTE G