YQGF_CHLAA
ID YQGF_CHLAA Reviewed; 153 AA.
AC A9WCR4;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=Caur_3849;
OS Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).
OC Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae;
OC Chloroflexaceae; Chloroflexus.
OX NCBI_TaxID=324602;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29366 / DSM 635 / J-10-fl;
RX PubMed=21714912; DOI=10.1186/1471-2164-12-334;
RA Tang K.H., Barry K., Chertkov O., Dalin E., Han C.S., Hauser L.J.,
RA Honchak B.M., Karbach L.E., Land M.L., Lapidus A., Larimer F.W.,
RA Mikhailova N., Pitluck S., Pierson B.K., Blankenship R.E.;
RT "Complete genome sequence of the filamentous anoxygenic phototrophic
RT bacterium Chloroflexus aurantiacus.";
RL BMC Genomics 12:334-334(2011).
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; CP000909; ABY37026.1; -; Genomic_DNA.
DR RefSeq; WP_012259679.1; NC_010175.1.
DR RefSeq; YP_001637415.1; NC_010175.1.
DR AlphaFoldDB; A9WCR4; -.
DR SMR; A9WCR4; -.
DR STRING; 324602.Caur_3849; -.
DR EnsemblBacteria; ABY37026; ABY37026; Caur_3849.
DR KEGG; cau:Caur_3849; -.
DR PATRIC; fig|324602.8.peg.4322; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_098240_2_0_0; -.
DR InParanoid; A9WCR4; -.
DR OMA; PMGWTAQ; -.
DR Proteomes; UP000002008; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IBA:GO_Central.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..153
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_1000082738"
SQ SEQUENCE 153 AA; 16710 MW; 4AA894BB65A1784E CRC64;
MNDQIILALD VGERRIGVAI SDADARIAAP LTTINAHPPE RAIAQIVRLV QERGVSRVVV
GLPLTMRGER GPQAEVVQRF ADTLSSALSC PVEMFDERLT SVAAEQMLRN LGLKPAKIKA
QIDQVAASII LQDYLDARRS NPNRSHELPH SSD