YQGF_DICT6
ID YQGF_DICT6 Reviewed; 139 AA.
AC B5YDY6;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=DICTH_0881;
OS Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).
OC Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.
OX NCBI_TaxID=309799;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35947 / DSM 3960 / H-6-12;
RX PubMed=24558247; DOI=10.1128/genomea.00109-14;
RA Coil D.A., Badger J.H., Forberger H.C., Riggs F., Madupu R., Fedorova N.,
RA Ward N., Robb F.T., Eisen J.A.;
RT "Complete Genome Sequence of the Extreme Thermophile Dictyoglomus
RT thermophilum H-6-12.";
RL Genome Announc. 2:0-0(2014).
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; CP001146; ACI18668.1; -; Genomic_DNA.
DR RefSeq; WP_012547300.1; NC_011297.1.
DR AlphaFoldDB; B5YDY6; -.
DR SMR; B5YDY6; -.
DR STRING; 309799.DICTH_0881; -.
DR EnsemblBacteria; ACI18668; ACI18668; DICTH_0881.
DR KEGG; dth:DICTH_0881; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_098240_2_0_0; -.
DR OMA; PMGWTAQ; -.
DR OrthoDB; 2075502at2; -.
DR Proteomes; UP000001733; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT CHAIN 1..139
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_1000131025"
SQ SEQUENCE 139 AA; 15999 MW; F782480DC961390A CRC64;
MRVLAIDWGE KYVGLAISDP LRIIAQGLDV WEIKGEEDFV SRLKRLVEDY QVKEIVLGYP
ISLRGHENER TQKVRHIAEL IESVIGIPVK FVDERLTTME AEKVLLEGDI KRKKRKLLKN
KQAAVIILQK YLDSSSLDT