ID   YQGF_EHRRG              Reviewed;         156 AA.
AC   Q5FFQ2;
DT   26-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2005, sequence version 1.
DT   03-AUG-2022, entry version 95.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN   OrderedLocusNames=ERGA_CDS_05820;
OS   Ehrlichia ruminantium (strain Gardel).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC   Anaplasmataceae; Ehrlichia.
OX   NCBI_TaxID=302409;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Gardel;
RX   PubMed=16547041; DOI=10.1128/jb.188.7.2533-2542.2006;
RA   Frutos R., Viari A., Ferraz C., Morgat A., Eychenie S., Kandassamy Y.,
RA   Chantal I., Bensaid A., Coissac E., Vachiery N., Demaille J., Martinez D.;
RT   "Comparative genomic analysis of three strains of Ehrlichia ruminantium
RT   reveals an active process of genome size plasticity.";
RL   J. Bacteriol. 188:2533-2542(2006).
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
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DR   EMBL; CR925677; CAI28034.1; -; Genomic_DNA.
DR   RefSeq; WP_011255694.1; NC_006831.1.
DR   AlphaFoldDB; Q5FFQ2; -.
DR   SMR; Q5FFQ2; -.
DR   EnsemblBacteria; CAI28034; CAI28034; ERGA_CDS_05820.
DR   KEGG; erg:ERGA_CDS_05820; -.
DR   HOGENOM; CLU_098240_2_2_5; -.
DR   OMA; PMGWTAQ; -.
DR   OrthoDB; 2075502at2; -.
DR   BioCyc; ERUM302409:ERGA_RS03000-MON; -.
DR   Proteomes; UP000000533; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR   CDD; cd16964; YqgF; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT   CHAIN           1..156
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_0000172061"
SQ   SEQUENCE   156 AA;  17789 MW;  511F43EE5F5F8D75 CRC64;
     MLYKNINEFE QVIDKTKRIM CLDFGEKKIG VALSDKTNLI AIPHSVYVRK NTRKDLGGLY
     GILIENDAGS MVIGLPLDLF GMGNELCDKV MLFANRMIKK YAINIYLHDE RYSTAMATRV
     AKLANIKRKE SQKIDDKIAA VLILQQVLDM VKIYQM