YQGF_FLAPJ
ID YQGF_FLAPJ Reviewed; 137 AA.
AC A6H0E5;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=FP1751;
OS Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 /
OS JIP02/86).
OC Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=402612;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86;
RX PubMed=17592475; DOI=10.1038/nbt1313;
RA Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B.,
RA Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F.,
RA Claverol S., Dumetz F., Le Henaff M., Benmansour A.;
RT "Complete genome sequence of the fish pathogen Flavobacterium
RT psychrophilum.";
RL Nat. Biotechnol. 25:763-769(2007).
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; AM398681; CAL43818.1; -; Genomic_DNA.
DR RefSeq; WP_011963861.1; NC_009613.3.
DR RefSeq; YP_001296625.1; NC_009613.3.
DR AlphaFoldDB; A6H0E5; -.
DR SMR; A6H0E5; -.
DR STRING; 402612.FP1751; -.
DR EnsemblBacteria; CAL43818; CAL43818; FP1751.
DR GeneID; 66552062; -.
DR KEGG; fps:FP1751; -.
DR PATRIC; fig|402612.5.peg.1770; -.
DR eggNOG; COG0816; Bacteria.
DR HOGENOM; CLU_098240_2_1_10; -.
DR OMA; PMGWTAQ; -.
DR Proteomes; UP000006394; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..137
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_1000061515"
SQ SEQUENCE 137 AA; 15644 MW; BD50AFE7B2C122E1 CRC64;
MPRILAIDYG QKRTGIAITD EMQIIASGLT TIASETSIAF LRDYFTKEKV EKVLIGEPKQ
MNGEPSQSTD IIEKFVTKFK NNFPDMAIER VDERFTSKMA FQTMIDSGLK KKQRQNKALV
DEISATIMLQ DYLTRKI