YQGF_PSEAE
ID YQGF_PSEAE Reviewed; 144 AA.
AC Q9I699;
DT 16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN OrderedLocusNames=PA0404;
OS Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
OS 14847 / LMG 12228 / 1C / PRS 101 / PAO1).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208964;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
RC PRS 101 / PAO1;
RX PubMed=10984043; DOI=10.1038/35023079;
RA Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P.,
RA Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., Lagrou M.,
RA Garber R.L., Goltry L., Tolentino E., Westbrock-Wadman S., Yuan Y.,
RA Brody L.L., Coulter S.N., Folger K.R., Kas A., Larbig K., Lim R.M.,
RA Smith K.A., Spencer D.H., Wong G.K.-S., Wu Z., Paulsen I.T., Reizer J.,
RA Saier M.H. Jr., Hancock R.E.W., Lory S., Olson M.V.;
RT "Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic
RT pathogen.";
RL Nature 406:959-964(2000).
CC -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC Rule:MF_00651}.
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DR EMBL; AE004091; AAG03793.1; -; Genomic_DNA.
DR PIR; B83596; B83596.
DR RefSeq; NP_249095.1; NC_002516.2.
DR RefSeq; WP_003084575.1; NZ_QZGE01000016.1.
DR AlphaFoldDB; Q9I699; -.
DR SMR; Q9I699; -.
DR STRING; 287.DR97_3372; -.
DR PaxDb; Q9I699; -.
DR PRIDE; Q9I699; -.
DR EnsemblBacteria; AAG03793; AAG03793; PA0404.
DR GeneID; 878247; -.
DR KEGG; pae:PA0404; -.
DR PATRIC; fig|208964.12.peg.425; -.
DR PseudoCAP; PA0404; -.
DR HOGENOM; CLU_098240_3_0_6; -.
DR InParanoid; Q9I699; -.
DR OMA; PMGWTAQ; -.
DR PhylomeDB; Q9I699; -.
DR BioCyc; PAER208964:G1FZ6-408-MON; -.
DR Proteomes; UP000002438; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0000967; P:rRNA 5'-end processing; IBA:GO_Central.
DR CDD; cd16964; YqgF; 1.
DR Gene3D; 3.30.420.140; -; 1.
DR HAMAP; MF_00651; Nuclease_YqgF; 1.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR005227; YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR33317; PTHR33317; 1.
DR Pfam; PF03652; RuvX; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Nuclease; Reference proteome; Ribosome biogenesis.
FT CHAIN 1..144
FT /note="Putative pre-16S rRNA nuclease"
FT /id="PRO_0000172118"
SQ SEQUENCE 144 AA; 15955 MW; D770BB69DF9C8EFD CRC64;
MASDKPLRLL LGFDYGTRQI GVAVGQAVTG QARELCVLKA QNGVPDWNRV EALIKEWQPD
AIVVGLPLNM DGSPSEMSER AEKFGRRLNG RFNLPVFTHD ERLTTYAAKG ERLAQGQRDG
YRERPVDALA AALLLEGWLA EHPD