ID   YQGF_PSEFL              Reviewed;         145 AA.
AC   Q9F4I8;
DT   16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   25-MAY-2022, entry version 76.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
OS   Pseudomonas fluorescens.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=294;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=WCS365;
RA   Camacho-Carvajal M.M., Scheublin T., Lugtenberg B.J.J., Bloemberg G.V.;
RT   "The regulatory protein PyrR of Pseudomona fluorescens is required for
RT   competitive root colonization.";
RL   Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
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DR   EMBL; AY007523; AAG15556.1; -; Genomic_DNA.
DR   RefSeq; WP_003177497.1; NZ_SMCJ01000004.1.
DR   AlphaFoldDB; Q9F4I8; -.
DR   SMR; Q9F4I8; -.
DR   STRING; 690597.JH730985_gene835; -.
DR   GeneID; 57262252; -.
DR   eggNOG; COG0816; Bacteria.
DR   OrthoDB; 2075502at2; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR   CDD; cd16964; YqgF; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT   CHAIN           1..145
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_0000172119"
SQ   SEQUENCE   145 AA;  16021 MW;  1649C3BB62725383 CRC64;
     MALRLLLGFD YGTKQIGVAV GQVITGQARE LCTLKAQNGV PDWNQVEALI KEWKPDAVVV
     GLPLNMDGTP SDMCLRAEKF ARRLNGRYNL PFYTHDERLT TFEAKGERLV RGGQKGSYRD
     NPVDAIAAAL LLQGWLDANA ALFET