ID   YQGF_THEFY              Reviewed;         159 AA.
AC   Q47N67;
DT   31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT   13-SEP-2005, sequence version 1.
DT   25-MAY-2022, entry version 114.
DE   RecName: Full=Putative pre-16S rRNA nuclease {ECO:0000255|HAMAP-Rule:MF_00651};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00651};
GN   OrderedLocusNames=Tfu_2069;
OS   Thermobifida fusca (strain YX).
OC   Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae;
OC   Thermobifida.
OX   NCBI_TaxID=269800;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YX;
RX   PubMed=17209016; DOI=10.1128/jb.01899-06;
RA   Lykidis A., Mavromatis K., Ivanova N., Anderson I., Land M., DiBartolo G.,
RA   Martinez M., Lapidus A., Lucas S., Copeland A., Richardson P., Wilson D.B.,
RA   Kyrpides N.;
RT   "Genome sequence and analysis of the soil cellulolytic actinomycete
RT   Thermobifida fusca YX.";
RL   J. Bacteriol. 189:2477-2486(2007).
CC   -!- FUNCTION: Could be a nuclease involved in processing of the 5'-end of
CC       pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00651}.
CC   -!- SIMILARITY: Belongs to the YqgF nuclease family. {ECO:0000255|HAMAP-
CC       Rule:MF_00651}.
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DR   EMBL; CP000088; AAZ56102.1; -; Genomic_DNA.
DR   RefSeq; WP_011292492.1; NC_007333.1.
DR   AlphaFoldDB; Q47N67; -.
DR   SMR; Q47N67; -.
DR   STRING; 269800.Tfu_2069; -.
DR   EnsemblBacteria; AAZ56102; AAZ56102; Tfu_2069.
DR   KEGG; tfu:Tfu_2069; -.
DR   eggNOG; COG0816; Bacteria.
DR   HOGENOM; CLU_098240_0_0_11; -.
DR   OMA; PMGWTAQ; -.
DR   OrthoDB; 2075502at2; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0000967; P:rRNA 5'-end processing; IEA:UniProtKB-UniRule.
DR   CDD; cd16964; YqgF; 1.
DR   Gene3D; 3.30.420.140; -; 1.
DR   HAMAP; MF_00651; Nuclease_YqgF; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR005227; YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR33317; PTHR33317; 1.
DR   Pfam; PF03652; RuvX; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF53098; SSF53098; 1.
DR   TIGRFAMs; TIGR00250; RNAse_H_YqgF; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; Hydrolase; Nuclease; Ribosome biogenesis.
FT   CHAIN           1..159
FT                   /note="Putative pre-16S rRNA nuclease"
FT                   /id="PRO_0000257611"
SQ   SEQUENCE   159 AA;  16935 MW;  DA6C697F0898DEB9 CRC64;
     MRTGVRLAVD PGAARIGVAR SDPDGILAIP VETIRRGPGD LDRIAALVLE YEAREVIVGY
     PASLSGAEGR AARAARAFAK ALARRLAPVP VRLVDERLTT VTAELHLRTG ASYRKRGARG
     GRARRSVIDQ AAATVLLQNA LDTERRTKLP PGELVEGTP