YRAK_ECOLI
ID YRAK_ECOLI Reviewed; 363 AA.
AC P43319; Q2M965;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 140.
DE RecName: Full=Uncharacterized fimbrial-like protein YraK;
DE Flags: Precursor;
GN Name=yraK; OrderedLocusNames=b3145, JW3114;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP FUNCTION, INDUCTION, AND DISRUPTION PHENOTYPE.
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=20345943; DOI=10.1111/j.1462-2920.2010.02202.x;
RA Korea C.G., Badouraly R., Prevost M.C., Ghigo J.M., Beloin C.;
RT "Escherichia coli K-12 possesses multiple cryptic but functional chaperone-
RT usher fimbriae with distinct surface specificities.";
RL Environ. Microbiol. 12:1957-1977(2010).
CC -!- FUNCTION: Part of the yraHIJK fimbrial operon. Could contribute to
CC adhesion to various surfaces in specific environmental niches.
CC Increases adhesion to eukaryotic T24 bladder epithelial cells in the
CC absence of fim operon. {ECO:0000269|PubMed:20345943}.
CC -!- SUBCELLULAR LOCATION: Fimbrium {ECO:0000305}.
CC -!- INDUCTION: Expression is negatively regulated by H-NS and subjected to
CC cAMP receptor protein (CRP)-mediated catabolite repression.
CC {ECO:0000269|PubMed:20345943}.
CC -!- DISRUPTION PHENOTYPE: Deletion of the operon under classical laboratory
CC conditions does not result in any major effect on E.coli capacity to
CC form biofilms compared with the wild-type strain.
CC {ECO:0000269|PubMed:20345943}.
CC -!- MISCELLANEOUS: The operon is cryptic under classical laboratory
CC conditions, but is functional when constitutively expressed.
CC {ECO:0000305|PubMed:20345943}.
CC -!- SIMILARITY: Belongs to the fimbrial protein family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA57948.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; U18997; AAA57948.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC76179.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77191.1; -; Genomic_DNA.
DR PIR; E65104; E65104.
DR RefSeq; NP_417614.1; NC_000913.3.
DR RefSeq; WP_000816992.1; NZ_LN832404.1.
DR AlphaFoldDB; P43319; -.
DR SMR; P43319; -.
DR BioGRID; 4261994; 426.
DR STRING; 511145.b3145; -.
DR PaxDb; P43319; -.
DR PRIDE; P43319; -.
DR EnsemblBacteria; AAC76179; AAC76179; b3145.
DR EnsemblBacteria; BAE77191; BAE77191; BAE77191.
DR GeneID; 947654; -.
DR KEGG; ecj:JW3114; -.
DR KEGG; eco:b3145; -.
DR PATRIC; fig|1411691.4.peg.3585; -.
DR EchoBASE; EB2629; -.
DR eggNOG; COG3539; Bacteria.
DR HOGENOM; CLU_066608_0_0_6; -.
DR OMA; TIACNCT; -.
DR PhylomeDB; P43319; -.
DR BioCyc; EcoCyc:G7640-MON; -.
DR PRO; PR:P43319; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009289; C:pilus; IBA:GO_Central.
DR GO; GO:0043709; P:cell adhesion involved in single-species biofilm formation; IMP:EcoCyc.
DR Gene3D; 2.60.40.1090; -; 1.
DR InterPro; IPR000259; Adhesion_dom_fimbrial.
DR InterPro; IPR036937; Adhesion_dom_fimbrial_sf.
DR InterPro; IPR008966; Adhesion_dom_sf.
DR Pfam; PF00419; Fimbrial; 1.
DR SUPFAM; SSF49401; SSF49401; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 2: Evidence at transcript level;
KW Fimbrium; Reference proteome; Signal.
FT SIGNAL 1..20
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 21..363
FT /note="Uncharacterized fimbrial-like protein YraK"
FT /id="PRO_0000013908"
SQ SEQUENCE 363 AA; 38535 MW; 33CAE8050D4088E2 CRC64;
MKRAPLITGL LLISTSCAYA SSGGCGADST SGATNYSSVV DDVTVNQTDN VTGREFTSAT
LSSTNWQYAC SCSAGKAVKL VYMVSPVLTT TGHQTGYYKL NDSLDIKTTL QANDIPGLTT
DQVVSVNTRF TQIKNNTVYS AATQTGVCQG DTSRYGPVNI GANTTFTLYV TKPFLGSMTI
PKTDIAVIKG AWVDGMGSPS TGDFHDLVKL SIQGNLTAPQ SCKINQGDVI KVNFGFINGQ
KFTTRNAMPD GFTPVDFDIT YDCGDTSKIK NSLQMRIDGT TGVVDQYNLV ARRRSSDNVP
DVGIRIENLG GGVANIPFQN GILPVDPSGH GTVNMRAWPV NLVGGELETG KFQGTATITV
IVR