YRD6_CAEEL
ID YRD6_CAEEL Reviewed; 1268 AA.
AC Q09575;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Uncharacterized protein K02A2.6;
GN ORFNames=K02A2.6;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
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DR EMBL; FO080416; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; B88209; B88209.
DR AlphaFoldDB; Q09575; -.
DR SMR; Q09575; -.
DR MEROPS; A28.A09; -.
DR EPD; Q09575; -.
DR PaxDb; Q09575; -.
DR HOGENOM; CLU_1846953_0_0_1; -.
DR InParanoid; Q09575; -.
DR Proteomes; UP000001940; Chromosome II.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0042575; C:DNA polymerase complex; IEA:UniProt.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProt.
DR GO; GO:0019899; F:enzyme binding; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd05484; retropepsin_like_LTR_2; 1.
DR Gene3D; 2.40.70.10; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR034128; K02A2.6-like.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF50630; SSF50630; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..1268
FT /note="Uncharacterized protein K02A2.6"
FT /id="PRO_0000065396"
FT DOMAIN 465..644
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00405"
FT DOMAIN 844..997
FT /note="Integrase catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00457"
FT ZN_FING 239..256
FT /note="CCHC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 191..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 253..273
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1092..1268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 191..208
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 253..269
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1123..1140
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1156..1182
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1183..1202
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1204..1251
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1254..1268
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1268 AA; 143493 MW; AACCAC4235AAE468 CRC64;
MNDLKRSIQK FQFNVAEPEA FKRWLARNKL TFVEDGKNLS ERERTRLLLG CLEESTFHRY
EDSQREISDI YSISFDDTVT ALTKIFGSTK SLMMRRQQCL QICRANGLSQ DYLDYTNSIS
DAVLDSKLSS MTSDEWSIFL FLRGLNSPGD EKAKLYLMQY VEASEKKNEK LKLSDVHDEW
MKFIQMHQQS KIVSVKPSKS SQQVDVNKVD TNRSKKKKKP IPRKPEKSSQ DSKKKGEIPT
CFYCNKKGHY ATNCRSNPKT GNQGGNKGKS KGCDSVHVDG LDVKTEHQAK HRMSVEVCGK
DVAFQLDTGS MITLISVKCW EKLGSPPLEK VPHRISCANG TPMAVKGRCL VKFKLKGIEY
TEYVYVRDRQ TNLLGTSWLN LCPQMRSALA QIVNQVSTSE TEASRLEVML KNDFPEVFKD
GLGLCTKEKA EFRTEENAVP VFKRARPVPY GSLEAVETEL NRLQEMGVIV PITYAKWAAP
IVVIKKKGTG KIRVCADFKC SGLNAALKDE FHPLPTSEDI FSRLKGTVYS QIDLKDAYLQ
VELDEEAQKL AVINTHRGIF KYLRMTFGLK PAPASFQKIM DKMVSGLTGV AVYWDDIIIS
ASSIEEHEKI LRELFERFKE YGFRVSAEKC AFAQKQVTFL GFVDEHGRRP DSKKTEAIRS
MKAPTDQKQL ASFLGAADWL SRMMQDHQQN ADDVVIAEIY DDDDDEDDSI IQKLNPVTET
DIRFESQKDH EVSSVVKLVR NDSWKPKPST EIEKHWIRYR DRLKLIHGCL LLDDRVIVPK
SLQKIVLKQL HEGHPGIVQM KQKARSFVFW RGLDSDIENM VRHCNNCQEN SKMPRVVPLN
PWPVPEAPWK RIHIDFAGPL NGCYLLVVVD AKTKYAEVKL TRSISAVTTI DLLEEIFSIH
GYPETIISDN GTQLTSHLFA QMCQSHGIEH KTSAVYYPRS NGAAERFVDT LKRGIAKIKG
EGSVNQQILN KFLISYRNTP HSALNGSTPA ECHFGRKIRT TMSLLMPTDR VLKVPKLTQY
QQNMKHHYEL RNGARAKAFQ VNQKVYVQVH HGNKSQWKHG VIRRKFGGVL YEVQVGDRMQ
KSHVNQIRTR YGDYSRSSVN PRLSSDPLGF VGESGGDEMS RNDDPVVTSN GSSTDVNRGS
RITSELKKKE SNAVRGQPCG SCSPTNNDVS APGYASRSHP TTDPSHSVRR SSRIRRVLDR
YGSSVEHPST STGTPRGSTS TQLGQASTRN GSRYTASGRN PSCQGNRYSS IRGEGVTARR
ERVRTTWR