YRDA_ECOLI
ID YRDA_ECOLI Reviewed; 184 AA.
AC P0A9W9; P45770; Q2M6U4;
DT 19-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2005, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Protein YrdA;
GN Name=yrdA; OrderedLocusNames=b3279, JW5710;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY.
RC STRAIN=B / BL21;
RX PubMed=10493123;
RX DOI=10.1002/(sici)1522-2683(19990801)20:11<2181::aid-elps2181>3.0.co;2-q;
RA Fountoulakis M., Takacs M.-F., Berndt P., Langen H., Takacs B.;
RT "Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite
RT chromatography.";
RL Electrophoresis 20:2181-2195(1999).
CC -!- SIMILARITY: Belongs to the gamma-class carbonic anhydrase family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA58076.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; U18997; AAA58076.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC76304.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE78012.1; -; Genomic_DNA.
DR PIR; B65120; B65120.
DR RefSeq; NP_417738.4; NC_000913.3.
DR RefSeq; WP_001286216.1; NZ_STEB01000038.1.
DR PDB; 3TIO; X-ray; 1.41 A; A/B/C/D/E/F=2-184.
DR PDB; 3TIS; X-ray; 2.30 A; A/B/C=2-184.
DR PDBsum; 3TIO; -.
DR PDBsum; 3TIS; -.
DR AlphaFoldDB; P0A9W9; -.
DR SMR; P0A9W9; -.
DR BioGRID; 4263477; 7.
DR DIP; DIP-48232N; -.
DR IntAct; P0A9W9; 1.
DR STRING; 511145.b3279; -.
DR PaxDb; P0A9W9; -.
DR PRIDE; P0A9W9; -.
DR EnsemblBacteria; AAC76304; AAC76304; b3279.
DR EnsemblBacteria; BAE78012; BAE78012; BAE78012.
DR GeneID; 66672827; -.
DR GeneID; 947775; -.
DR KEGG; ecj:JW5710; -.
DR KEGG; eco:b3279; -.
DR PATRIC; fig|511145.12.peg.3373; -.
DR EchoBASE; EB2687; -.
DR eggNOG; COG0663; Bacteria.
DR HOGENOM; CLU_064827_7_0_6; -.
DR InParanoid; P0A9W9; -.
DR OMA; YVTIGHN; -.
DR PhylomeDB; P0A9W9; -.
DR BioCyc; EcoCyc:G7696-MON; -.
DR PRO; PR:P0A9W9; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0032991; C:protein-containing complex; IDA:EcoCyc.
DR GO; GO:0042802; F:identical protein binding; IDA:EcoCyc.
DR GO; GO:0008270; F:zinc ion binding; IDA:EcoCyc.
DR InterPro; IPR001451; Hexapep.
DR InterPro; IPR011004; Trimer_LpxA-like_sf.
DR Pfam; PF00132; Hexapep; 2.
DR SUPFAM; SSF51161; SSF51161; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..184
FT /note="Protein YrdA"
FT /id="PRO_0000077470"
FT STRAND 26..33
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 44..54
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 65..67
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 81..83
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 94..97
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 102..106
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 120..124
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 140..143
FT /evidence="ECO:0007829|PDB:3TIO"
FT TURN 144..147
FT /evidence="ECO:0007829|PDB:3TIO"
FT STRAND 148..152
FT /evidence="ECO:0007829|PDB:3TIO"
FT HELIX 155..177
FT /evidence="ECO:0007829|PDB:3TIO"
SQ SEQUENCE 184 AA; 20245 MW; 3F0C08819AA43983 CRC64;
MSDVLRPYRD LFPQIGQRVM IDDSSVVIGD VRLADDVGIW PLVVIRGDVH YVQIGARTNI
QDGSMLHVTH KSSYNPDGNP LTIGEDVTVG HKVMLHGCTI GNRVLVGMGS ILLDGAIVED
DVMIGAGSLV PQNKRLESGY LYLGSPVKQI RPLSDEEKAG LRYSANNYVK WKDEYLDQGN
QTQP