ID   YRDD_ECOLI              Reviewed;         180 AA.
AC   P45771; Q2M6U8; Q6BF39;
DT   01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT   11-OCT-2004, sequence version 2.
DT   03-AUG-2022, entry version 139.
DE   RecName: Full=Uncharacterized protein YrdD;
GN   Name=yrdD; OrderedLocusNames=b3283, JW5949;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [2]
RP   SEQUENCE REVISION.
RX   PubMed=16397293; DOI=10.1093/nar/gkj405;
RA   Riley M., Abe T., Arnaud M.B., Berlyn M.K.B., Blattner F.R.,
RA   Chaudhuri R.R., Glasner J.D., Horiuchi T., Keseler I.M., Kosuge T.,
RA   Mori H., Perna N.T., Plunkett G. III, Rudd K.E., Serres M.H., Thomas G.H.,
RA   Thomson N.R., Wishart D., Wanner B.L.;
RT   "Escherichia coli K-12: a cooperatively developed annotation snapshot
RT   -- 2005.";
RL   Nucleic Acids Res. 34:1-9(2006).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
CC   -!- SIMILARITY: To H.influenzae HI_0656.1. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAA58080.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; U18997; AAA58080.1; ALT_FRAME; Genomic_DNA.
DR   EMBL; U00096; AAT48175.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE78008.1; -; Genomic_DNA.
DR   PIR; F65120; F65120.
DR   RefSeq; WP_001129722.1; NZ_SSZK01000040.1.
DR   RefSeq; YP_026210.1; NC_000913.3.
DR   AlphaFoldDB; P45771; -.
DR   SMR; P45771; -.
DR   BioGRID; 4259329; 70.
DR   BioGRID; 852094; 7.
DR   IntAct; P45771; 7.
DR   STRING; 511145.b3283; -.
DR   jPOST; P45771; -.
DR   PaxDb; P45771; -.
DR   PRIDE; P45771; -.
DR   EnsemblBacteria; AAT48175; AAT48175; b3283.
DR   EnsemblBacteria; BAE78008; BAE78008; BAE78008.
DR   GeneID; 947782; -.
DR   KEGG; ecj:JW5949; -.
DR   KEGG; eco:b3283; -.
DR   PATRIC; fig|1411691.4.peg.3448; -.
DR   EchoBASE; EB2690; -.
DR   eggNOG; COG0551; Bacteria.
DR   HOGENOM; CLU_104661_0_0_6; -.
DR   InParanoid; P45771; -.
DR   OMA; HYPECDY; -.
DR   PhylomeDB; P45771; -.
DR   BioCyc; EcoCyc:G7699-MON; -.
DR   PRO; PR:P45771; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005694; C:chromosome; IEA:InterPro.
DR   GO; GO:0003917; F:DNA topoisomerase type I (single strand cut, ATP-independent) activity; IEA:InterPro.
DR   GO; GO:0005506; F:iron ion binding; IDA:EcoCyc.
DR   GO; GO:0003697; F:single-stranded DNA binding; IDA:EcoCyc.
DR   GO; GO:0008270; F:zinc ion binding; IDA:EcoCyc.
DR   GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR   InterPro; IPR000380; Topo_IA.
DR   InterPro; IPR013498; Topo_IA_Znf.
DR   PANTHER; PTHR42785; PTHR42785; 3.
DR   Pfam; PF01396; zf-C4_Topoisom; 4.
PE   4: Predicted;
KW   Reference proteome.
FT   CHAIN           1..180
FT                   /note="Uncharacterized protein YrdD"
FT                   /id="PRO_0000169506"
SQ   SEQUENCE   180 AA;  19871 MW;  5DD3C627D019AF31 CRC64;
     MAKSALFTVR NNESCPKCGA ELVIRSGKHG PFLGCSQYPA CDYVRPLKSS ADGHIVKVLE
     GQVCPACGAN LVLRQGRFGM FIGCINYPEC EHTELIDKPD ETAITCPQCR TGHLVQRRSR
     YGKTFHSCDR YPECQFAINF KPIAGECPEC HYPLLIEKKT AQGVKHFCAS KQCGKPVSAE