YSL11_ORYSJ
ID YSL11_ORYSJ Reviewed; 712 AA.
AC Q7X660; A0A0N7KJE0; Q0JBM0; Q25CH5; Q5JQD6;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=Probable metal-nicotianamine transporter YSL11;
DE AltName: Full=Protein YELLOW STRIPE LIKE 11;
DE Short=OsYSL11;
GN Name=YSL11; OrderedLocusNames=Os04g0524900, LOC_Os04g44330;
GN ORFNames=OsJ_014870, OSJNBa0038O10.1, OSJNBb0065J09.18;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nipponbare;
RX PubMed=15255870; DOI=10.1111/j.1365-313x.2004.02146.x;
RA Koike S., Inoue H., Mizuno D., Takahashi M., Nakanishi H., Mori S.,
RA Nishizawa N.K.;
RT "OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron
RT and expressed in the phloem.";
RL Plant J. 39:415-424(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: May be involved in the transport of nicotianamine-chelated
CC metals. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the YSL (TC 2.A.67.2) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF15267.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB190921; BAE91891.1; -; mRNA.
DR EMBL; AL663010; CAI44638.1; -; Genomic_DNA.
DR EMBL; AL663019; CAE05635.1; -; Genomic_DNA.
DR EMBL; AP008210; BAF15267.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014960; BAS90153.1; -; Genomic_DNA.
DR EMBL; CM000141; EAZ31387.1; -; Genomic_DNA.
DR RefSeq; XP_015635780.1; XM_015780294.1.
DR AlphaFoldDB; Q7X660; -.
DR STRING; 4530.OS04T0524900-00; -.
DR PaxDb; Q7X660; -.
DR PRIDE; Q7X660; -.
DR EnsemblPlants; Os04t0524900-00; Os04t0524900-00; Os04g0524900.
DR GeneID; 4336445; -.
DR Gramene; Os04t0524900-00; Os04t0524900-00; Os04g0524900.
DR KEGG; osa:4336445; -.
DR eggNOG; ENOG502QUDW; Eukaryota.
DR HOGENOM; CLU_015477_2_0_1; -.
DR InParanoid; Q7X660; -.
DR OMA; AWANASH; -.
DR OrthoDB; 525938at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR Genevisible; Q7X660; OS.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0035673; F:oligopeptide transmembrane transporter activity; IEA:InterPro.
DR InterPro; IPR004813; OPT.
DR InterPro; IPR045035; YSL-like.
DR PANTHER; PTHR31645; PTHR31645; 1.
DR Pfam; PF03169; OPT; 1.
DR TIGRFAMs; TIGR00728; OPT_sfam; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..712
FT /note="Probable metal-nicotianamine transporter YSL11"
FT /id="PRO_0000363874"
FT TRANSMEM 70..90
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 93..113
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 138..158
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 180..200
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 242..262
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 300..320
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 345..365
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 418..438
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 446..466
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 478..498
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 532..552
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 593..613
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 631..651
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 666..686
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 25..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 127
FT /note="F -> L (in Ref. 1; BAE91891)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 712 AA; 77816 MW; EB360E4FE635A92F CRC64;
MASAAANNSS SAAYDAAETG GLLRRRNTTA AARGNAGEEE EEAEAVAPSV EQAFADKPVP
SWREQLTVRA FVVGFLLSIM FNIIVMKLSL TTGVIPSLNV SASLLGFFLV RLWTAAIERV
GFLKQPFTRQ ENTVIQTCVV SAYGVAFSGG FGSYLFGMSE TIAKQATEAN DPMNIKNPHL
GWIIGFMFLV SFVGLFALVP MRKVMIVDYK LTYPSGTATA YLINGFHTPE GADLAKKQVR
TLGKYFSISF LWAFFQWFYT AGDNCGFSSF PTFGLEAFKN RFYFDFSPTY VGVGMICPYI
VNVSLLIGGI ISWGIMWPLI SKKKGSWYPE TLPESSLLGL QAYKVFITIA VILGDGLYNF
VKVFGYTIKG FIVMYKNKNS NTLPISDNGT PANATEEESF DDKRRNELFL KDQIPKTVAI
GGYVVLAVIT SGCLPLIIPQ LKWYYILIAY IFAPIMAFCN AYGSGLTDWS LATTYGKLAI
FVFGAWAGAS HGGVLVGLAA CGVMMNIVGT ASDLMQDFKT GYMTLASPRS MFVSQVIGTA
MGCVIAPCVF WLFYKSFNIG ASDGAYPAPY TIMYRNMAIL GVNGLSSLPK YCLTLCYIAF
VAAFIINLIK DLVPERVAKY IPIPMAAAIP FYLGPYFAID MFMGSVILYF WEWRNKDEAQ
SFGPAVASGL MCGDGLWALP QAVLSLVNVN PPLCMKFLSR AANAKVDTFL GN
