YSL14_ORYSJ
ID YSL14_ORYSJ Reviewed; 727 AA.
AC Q6H7J6; Q0DZB5; Q3V7B7;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Probable metal-nicotianamine transporter YSL14;
DE AltName: Full=Protein YELLOW STRIPE LIKE 14;
DE Short=OsYSL14;
GN Name=YSL14; OrderedLocusNames=Os02g0633300, LOC_Os02g42220;
GN ORFNames=OJ1643_A10.18;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, GENE FAMILY, AND
RP NOMENCLATURE.
RC STRAIN=cv. Nipponbare;
RX PubMed=15255870; DOI=10.1111/j.1365-313x.2004.02146.x;
RA Koike S., Inoue H., Mizuno D., Takahashi M., Nakanishi H., Mori S.,
RA Nishizawa N.K.;
RT "OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron
RT and expressed in the phloem.";
RL Plant J. 39:415-424(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP TISSUE SPECIFICITY.
RX PubMed=19049971; DOI=10.1074/jbc.m806042200;
RA Inoue H., Kobayashi T., Nozoye T., Takahashi M., Kakei Y., Suzuki K.,
RA Nakazono M., Nakanishi H., Mori S., Nishizawa N.K.;
RT "Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid Transporter
RT expressed in the roots and is essential for iron uptake in early growth of
RT the seedlings.";
RL J. Biol. Chem. 284:3470-3479(2009).
CC -!- FUNCTION: May be involved in the transport of nicotianamine-chelated
CC metals. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves and at low levels in roots.
CC {ECO:0000269|PubMed:15255870, ECO:0000269|PubMed:19049971}.
CC -!- SIMILARITY: Belongs to the YSL (TC 2.A.67.2) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF09423.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB164645; BAE44205.1; -; mRNA.
DR EMBL; AP004192; BAD25303.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF09423.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015625646.1; XM_015770160.1.
DR AlphaFoldDB; Q6H7J6; -.
DR STRING; 4530.OS02T0633300-01; -.
DR PaxDb; Q6H7J6; -.
DR PRIDE; Q6H7J6; -.
DR GeneID; 9267947; -.
DR KEGG; osa:9267947; -.
DR InParanoid; Q6H7J6; -.
DR OrthoDB; 525938at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0035673; F:oligopeptide transmembrane transporter activity; IEA:InterPro.
DR InterPro; IPR004813; OPT.
DR InterPro; IPR045035; YSL-like.
DR PANTHER; PTHR31645; PTHR31645; 1.
DR Pfam; PF03169; OPT; 1.
DR TIGRFAMs; TIGR00728; OPT_sfam; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..727
FT /note="Probable metal-nicotianamine transporter YSL14"
FT /id="PRO_0000363877"
FT TRANSMEM 84..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 107..127
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 152..172
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 194..214
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 256..276
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 314..334
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 359..379
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 432..452
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 460..480
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 492..512
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 546..566
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 604..624
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 646..666
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 681..701
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 5
FT /note="T -> S (in Ref. 1; BAE44205)"
FT /evidence="ECO:0000305"
FT CONFLICT 47..49
FT /note="GGG -> RGR (in Ref. 1; BAE44205)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 727 AA; 78494 MW; 04DBF9375C381B21 CRC64;
MAQHTAAAAG GDEEVAEAEA AAAAAAGSTL RHRHAGKGAE EHEAAGGGGG GRNGGADDPD
ATSVERVFAD KAVPSWREQL TLRAFVVSAL LAVMFSVIVM KLNLTTGIIP SLNVSAGLLG
FFFVRLWTSA VERIGLLKQP FTRQENTVIQ TCVVSAYGIA FSGGFGSYLF GMSETIAKQA
TEAKDAQNIK DPHLGWMIGF LFLVSFIGLF ALVPLRKIMI VDYKLTYPSG TATAYLINGF
HTPEGAKLAK KQVKTLGKYF LFSFFWGFFQ WFYTAGDDCG FKNFPTLGLE AYNNRFFFDF
SPTYVGVGMI CPYIVNVSVL LGGILSWGVM WPLIAKKKGS WYPADISDNS LHGLQAYRVF
ISIALILGDG LYNFLKVLIR TIAGFISMVQ NNSKGMLPVS DNGMSMSTAE EVSFDDERRT
EIFLKDQIPK SVAYGGYVVV AALSIGTLPE IFPQLKWYYI LVAYIVAPVL AFCNAYGSGL
TDWSLASTYG KLAIFVFGAW AGLSHGGVLV GLAACGVMMS IVSTASDLMQ DFKTGYLTLA
SPRSMFISQV IGTGMGCVIA PCVFWLFYKA FSNIGTSGTE YPAPYAIVYR NMAILGVDGF
NSLPENCLTL CYIFFAAAIA INLIRDLAPH KVSRFIPLPM AMAIPFYIGS YFAIDMFLGS
VILFVWEKLN KAKADAFGPA VASGLICGDG IWTLPQSILA LAKVKPPICM KFLSRAANAK
VDSFLAG