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YSL6_ARATH
ID   YSL6_ARATH              Reviewed;         676 AA.
AC   Q6R3K6; Q8L859; Q8LB74; Q9LSD4;
DT   13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT   13-NOV-2007, sequence version 2.
DT   03-AUG-2022, entry version 82.
DE   RecName: Full=Probable metal-nicotianamine transporter YSL6;
DE   AltName: Full=Protein YELLOW STRIPE LIKE 6;
DE            Short=AtYSL6;
GN   Name=YSL6; OrderedLocusNames=At3g27020; ORFNames=MOJ10.9;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RA   Roberts L.A., Walker E.L.;
RT   "The yellow stripe-like (YSL) family of metal-nicotianamine transporters.";
RL   Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT   features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:131-135(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: May be involved in the transport of nicotianamine-chelated
CC       metals. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000305}.
CC   -!- MISCELLANEOUS: Was also erroneously assigned to At3g27010.
CC       {ECO:0000305|PubMed:14593172}.
CC   -!- SIMILARITY: Belongs to the YSL (TC 2.A.67.2) family. {ECO:0000305}.
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DR   EMBL; AY515564; AAS00695.1; -; mRNA.
DR   EMBL; AB026649; BAB01083.1; -; Genomic_DNA.
DR   EMBL; CP002686; AEE77255.1; -; Genomic_DNA.
DR   EMBL; AY120725; AAM53283.1; -; mRNA.
DR   EMBL; AY087380; AAM64930.1; -; mRNA.
DR   RefSeq; NP_566806.1; NM_113616.3.
DR   AlphaFoldDB; Q6R3K6; -.
DR   STRING; 3702.AT3G27020.1; -.
DR   PaxDb; Q6R3K6; -.
DR   PRIDE; Q6R3K6; -.
DR   ProteomicsDB; 242345; -.
DR   EnsemblPlants; AT3G27020.1; AT3G27020.1; AT3G27020.
DR   GeneID; 822319; -.
DR   Gramene; AT3G27020.1; AT3G27020.1; AT3G27020.
DR   KEGG; ath:AT3G27020; -.
DR   Araport; AT3G27020; -.
DR   TAIR; locus:2091970; AT3G27020.
DR   eggNOG; ENOG502QQ2H; Eukaryota.
DR   HOGENOM; CLU_015477_2_0_1; -.
DR   InParanoid; Q6R3K6; -.
DR   OMA; AGNQVRQ; -.
DR   OrthoDB; 525938at2759; -.
DR   PhylomeDB; Q6R3K6; -.
DR   PRO; PR:Q6R3K6; -.
DR   Proteomes; UP000006548; Chromosome 3.
DR   ExpressionAtlas; Q6R3K6; baseline and differential.
DR   Genevisible; Q6R3K6; AT.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IBA:GO_Central.
DR   GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR   GO; GO:0009705; C:plant-type vacuole membrane; IDA:TAIR.
DR   GO; GO:0009526; C:plastid envelope; IDA:TAIR.
DR   GO; GO:0005774; C:vacuolar membrane; IBA:GO_Central.
DR   GO; GO:0035673; F:oligopeptide transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0034755; P:iron ion transmembrane transport; IGI:TAIR.
DR   InterPro; IPR004813; OPT.
DR   InterPro; IPR045035; YSL-like.
DR   PANTHER; PTHR31645; PTHR31645; 1.
DR   Pfam; PF03169; OPT; 1.
DR   TIGRFAMs; TIGR00728; OPT_sfam; 1.
PE   2: Evidence at transcript level;
KW   Membrane; Reference proteome; Transmembrane; Transmembrane helix;
KW   Transport.
FT   CHAIN           1..676
FT                   /note="Probable metal-nicotianamine transporter YSL6"
FT                   /id="PRO_0000311417"
FT   TRANSMEM        38..58
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        62..82
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        110..130
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        154..174
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        276..296
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        321..341
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        392..412
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        413..433
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        452..472
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        510..530
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        561..581
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        604..624
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        639..659
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   CONFLICT        111
FT                   /note="V -> VVA (in Ref. 1; AAS00695)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        241..247
FT                   /note="CGFDNFP -> WELKLT (in Ref. 1; AAS00695)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        260
FT                   /note="F -> L (in Ref. 5; AAM64930)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        263
FT                   /note="S -> R (in Ref. 4; AAM53283)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        462
FT                   /note="G -> E (in Ref. 1; AAS00695)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   676 AA;  73573 MW;  1DA93272E4AB2A87 CRC64;
     MGTEIPRSAE ISEALLPPES EKTVTATEEH VPEWKEQITI RGLTVSALLG TLFCIITHKL
     NLTVGIIPSL NVAAGLLGFF FVKSWTGFLS KLGFTVKPFT KQENTVIQTC VVACYGLAFS
     GGFGSYLIAM DEKTYKLIGA DYPGNHAEDV INPGLWWMIG FLFVVSFLGL FSLVPLRKVM
     VLDYKLTYPS GTATAMLINS FHTNTGAELA GNQVKCLGKY LSLSLIWSCF KWFFSGIGDA
     CGFDNFPTLG LTLFKNTFYF DFSPTYIGCG LICPHIVNCS VLLGAIISWG ILWPFVSQHA
     GDWYPADLGS NDFKGLYGYK VFIAIAIILG DGLYNLVKII AVTVKELCSS RSRRLNLPIV
     TDGVDDSEAS EILLVKKKRD EVFLKDRIPL EFAIAGYVGL AAISTATIPI IFPPLKWYFV
     LCSYFIAPAL AFCNSYGTGL TDWSLASTYG KIGLFIIASV VGSDGGVIAG LAACGVMMSI
     VSTAADLMQD FKTGYLTLSS AKSMFVSQLV GTAMGCVIAP LTFWLFWTAF DIGDPNGPYK
     APYAVIFREM AILGIEGFAE LPKHCLALCY GFFIAALIVN LLRDITPPKI SQFIPIPMAM
     AVPFYIGAYF AIDMFVGTVI LFVWERINRK DAEDFAGAVA SGLICGDGIW TIPSAILSIL
     RINPPICMYF GPSSAR
 
 
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