YSO1_CAEEL
ID YSO1_CAEEL Reviewed; 468 AA.
AC Q10127;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2005, sequence version 2.
DT 03-AUG-2022, entry version 136.
DE RecName: Full=Putative zinc finger protein F56D1.1;
GN ORFNames=F56D1.1;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR EMBL; FO081078; CCD68954.1; -; Genomic_DNA.
DR PIR; T30114; T30114.
DR RefSeq; NP_495042.2; NM_062641.2.
DR AlphaFoldDB; Q10127; -.
DR STRING; 6239.F56D1.1; -.
DR PaxDb; Q10127; -.
DR EnsemblMetazoa; F56D1.1.1; F56D1.1.1; WBGene00018959.
DR GeneID; 186375; -.
DR KEGG; cel:CELE_F56D1.1; -.
DR UCSC; F56D1.1; c. elegans.
DR CTD; 186375; -.
DR WormBase; F56D1.1; CE52832; WBGene00018959; -.
DR eggNOG; KOG1721; Eukaryota.
DR GeneTree; ENSGT00940000162287; -.
DR HOGENOM; CLU_584268_0_0_1; -.
DR InParanoid; Q10127; -.
DR OMA; NELRTHM; -.
DR OrthoDB; 1318335at2759; -.
DR PhylomeDB; Q10127; -.
DR PRO; PR:Q10127; -.
DR Proteomes; UP000001940; Chromosome II.
DR Bgee; WBGene00018959; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 2.
DR SMART; SM00355; ZnF_C2H2; 7.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 4.
PE 4: Predicted;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat; Zinc;
KW Zinc-finger.
FT CHAIN 1..468
FT /note="Putative zinc finger protein F56D1.1"
FT /id="PRO_0000046904"
FT ZN_FING 79..101
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 136..159
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 350..373
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 392..423
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 429..452
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 17..76
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..76
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 53775 MW; 620D9D631626E127 CRC64;
MKNYFYCYPK SKIQMISSFE PPSSSSSSSD EDSDDEYREE DGNSERSNSK VCIEEVEEVE
KEEIASRKRK RGKTKDEFHP CPFCEKKFRY PNKLREHIKI HDSNRYQCLE CSTITKFGTY
GELRAHHKLH HSKASHKCPQ CSYTNEKPAF IRRHFEQNHV DGIPCTITGC CIKVAKNRLK
AHIKEYHTSI PLSTEQTRSK LSFNKCPLCE YKPDVSDDDP EQQQKDLEDH VQRIHEEREP
ALCTLGCGVY LGSGSVSEHL STCSSLIQNI PSSSQSTPAL QNDEWNDANT ETTLSTITGT
SSQFERDSVS EVTNDLSENI NDIDEEIEFG TTEPPNKIRK HSRSRVHGDF SCEICLKTFT
LRDNLRKHVR VYHSENSQKV VKSTGPKHQE QYKCDRKSKD GDETTCGKTF RTEQALHDHF
NVHDGIKPYS CHTCNQKFHA RDRFAVHLSK YHQTSIKDLT ARVATFGC
