YSV5_CAEEL
ID YSV5_CAEEL Reviewed; 490 AA.
AC Q10011;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 02-DEC-2020, sequence version 3.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Uncharacterized protein T19C3.5;
DE Flags: Precursor;
GN ORFNames=T19C3.5 {ECO:0000312|WormBase:T19C3.5};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-405, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=12754521; DOI=10.1038/nbt829;
RA Kaji H., Saito H., Yamauchi Y., Shinkawa T., Taoka M., Hirabayashi J.,
RA Kasai K., Takahashi N., Isobe T.;
RT "Lectin affinity capture, isotope-coded tagging and mass spectrometry to
RT identify N-linked glycoproteins.";
RL Nat. Biotechnol. 21:667-672(2003).
RN [3]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-405, AND IDENTIFICATION BY MASS
RP SPECTROMETRY.
RX PubMed=15888633; DOI=10.1093/glycob/cwi075;
RA Fan X., She Y.-M., Bagshaw R.D., Callahan J.W., Schachter H., Mahuran D.J.;
RT "Identification of the hydrophobic glycoproteins of Caenorhabditis
RT elegans.";
RL Glycobiology 15:952-964(2005).
RN [4]
RP GLYCOSYLATION [LARGE SCALE ANALYSIS] AT ASN-405 AND ASN-415, AND
RP IDENTIFICATION BY MASS SPECTROMETRY.
RC STRAIN=Bristol N2;
RX PubMed=17761667; DOI=10.1074/mcp.m600392-mcp200;
RA Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T.,
RA Taoka M., Takahashi N., Isobe T.;
RT "Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis
RT elegans and suggests an atypical translocation mechanism for integral
RT membrane proteins.";
RL Mol. Cell. Proteomics 6:2100-2109(2007).
CC -!- SIMILARITY: Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
CC {ECO:0000305}.
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DR EMBL; BX284603; CCD73737.2; -; Genomic_DNA.
DR PIR; T16889; T16889.
DR RefSeq; NP_497222.1; NM_064821.3.
DR AlphaFoldDB; Q10011; -.
DR SMR; Q10011; -.
DR STRING; 6239.T19C3.5; -.
DR iPTMnet; Q10011; -.
DR EPD; Q10011; -.
DR PaxDb; Q10011; -.
DR PeptideAtlas; Q10011; -.
DR EnsemblMetazoa; T19C3.5.1; T19C3.5.1; WBGene00020563.
DR UCSC; T19C3.5; c. elegans.
DR WormBase; T19C3.5; CE54124; WBGene00020563; -.
DR eggNOG; KOG4160; Eukaryota.
DR GeneTree; ENSGT01020000230460; -.
DR HOGENOM; CLU_044130_0_0_1; -.
DR InParanoid; Q10011; -.
DR OrthoDB; 1242894at2759; -.
DR PhylomeDB; Q10011; -.
DR Reactome; R-CEL-166016; Toll Like Receptor 4 (TLR4) Cascade.
DR Reactome; R-CEL-5686938; Regulation of TLR by endogenous ligand.
DR PRO; PR:Q10011; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00020563; Expressed in adult organism and 2 other tissues.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR InterPro; IPR017943; Bactericidal_perm-incr_a/b_dom.
DR InterPro; IPR032942; BPI/LBP/Plunc.
DR InterPro; IPR001124; Lipid-bd_serum_glycop_C.
DR InterPro; IPR017942; Lipid-bd_serum_glycop_N.
DR PANTHER; PTHR10504; PTHR10504; 1.
DR Pfam; PF01273; LBP_BPI_CETP; 1.
DR Pfam; PF02886; LBP_BPI_CETP_C; 1.
DR SMART; SM00328; BPI1; 1.
DR SMART; SM00329; BPI2; 1.
DR SUPFAM; SSF55394; SSF55394; 2.
PE 1: Evidence at protein level;
KW Disulfide bond; Glycoprotein; Reference proteome; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..490
FT /note="Uncharacterized protein T19C3.5"
FT /id="PRO_0000017173"
FT CARBOHYD 32
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 145
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 271
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 369
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 405
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:12754521,
FT ECO:0000269|PubMed:15888633, ECO:0000269|PubMed:17761667"
FT CARBOHYD 415
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000269|PubMed:17761667"
FT CARBOHYD 465
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 164..204
FT /evidence="ECO:0000250|UniProtKB:P17213"
SQ SEQUENCE 490 AA; 54808 MW; 65BEC8DE60B20CA6 CRC64;
MEKSVSGPNI FNMKLLLLLL ILTISFCYAF NNETLKVRLN VPFFKFFSKN GHHVVDEEIP
KITIPEIRLP FSSSIGHGVV RTDDLKIEKF SSPKIDFKLS KTGINWWTTG GAIKLSGRWH
AKFTEVITIR DKGWLNAYAT GIQMNISAAA YQLDGQPQVK IGDCTVQIQK LDVEIGGSVL
SWLVNLFETP FSKLVKKVIN AQACSAAKGI LIEEANRFLH SLPSHVDVGA NFYVDYFLTQ
NPHATSEFTE FDLAADIVYG KSLCHPINIG NWTDASSTPG MLTSWISVSI PNCLIHSAHQ
NQLVKLLVSK DIPVVEPYLR TSCGFLGLCI GKFFKKLRNE YPNNHVDLFF HTYSTPYFVM
SEKEGVMLNM SLAVDLFINP YAKTKQNILA RLVVDTFSTV EPFLNHTRIH GRLQNSTITA
RVDFSNIGDI PKAFLSAFSS ILSMTAREAV RSVLGVGIPI PSYDNVTLAD SSTIEVFDQF
LRANIDFEYK