YU88_ARATH
ID YU88_ARATH Reviewed; 410 AA.
AC Q9M2D2; Q93YZ0;
DT 21-FEB-2002, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2002, sequence version 2.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=UPF0187 protein At3g61320, chloroplastic;
DE Flags: Precursor;
GN OrderedLocusNames=At3g61320; ORFNames=T20K12.220;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000305};
CC Multi-pass membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the UPF0187 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB71062.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AL137898; CAB71062.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002686; AEE80187.1; -; Genomic_DNA.
DR EMBL; AY058894; AAL24280.1; -; mRNA.
DR EMBL; AY143083; AAN12915.1; -; mRNA.
DR PIR; T47924; T47924.
DR RefSeq; NP_191691.2; NM_115996.4.
DR AlphaFoldDB; Q9M2D2; -.
DR SMR; Q9M2D2; -.
DR BioGRID; 10618; 3.
DR IntAct; Q9M2D2; 3.
DR STRING; 3702.AT3G61320.1; -.
DR TCDB; 1.A.46.2.7; the anion channel-forming bestrophin (bestrophin) family.
DR PaxDb; Q9M2D2; -.
DR PRIDE; Q9M2D2; -.
DR ProteomicsDB; 232316; -.
DR EnsemblPlants; AT3G61320.1; AT3G61320.1; AT3G61320.
DR GeneID; 825304; -.
DR Gramene; AT3G61320.1; AT3G61320.1; AT3G61320.
DR KEGG; ath:AT3G61320; -.
DR Araport; AT3G61320; -.
DR TAIR; locus:2098881; AT3G61320.
DR eggNOG; ENOG502QSQE; Eukaryota.
DR HOGENOM; CLU_029790_7_0_1; -.
DR InParanoid; Q9M2D2; -.
DR OMA; KLWGALL; -.
DR PhylomeDB; Q9M2D2; -.
DR PRO; PR:Q9M2D2; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9M2D2; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR GO; GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009533; C:chloroplast stromal thylakoid; IDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0042651; C:thylakoid membrane; IDA:TAIR.
DR GO; GO:0005247; F:voltage-gated chloride channel activity; IDA:TAIR.
DR GO; GO:0019684; P:photosynthesis, light reaction; IMP:TAIR.
DR GO; GO:0042548; P:regulation of photosynthesis, light reaction; IDA:TAIR.
DR GO; GO:0010027; P:thylakoid membrane organization; IMP:TAIR.
DR InterPro; IPR024701; At3g61320-like.
DR InterPro; IPR021134; Bestrophin/UPF0187.
DR InterPro; IPR044669; UPF0187.
DR PANTHER; PTHR33281; PTHR33281; 1.
DR Pfam; PF01062; Bestrophin; 1.
DR PIRSF; PIRSF016988; UCP016988; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Membrane; Plastid; Reference proteome; Transit peptide;
KW Transmembrane; Transmembrane helix.
FT TRANSIT 1..?
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN ?..410
FT /note="UPF0187 protein At3g61320, chloroplastic"
FT /id="PRO_0000036237"
FT TRANSMEM 111..133
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 337..357
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 410 AA; 46539 MW; ACA72E3EB957D12B CRC64;
MYQSMNLSVS SNFTHRSLLE SRFPIFSTGF RKSVNLKPPR VSSGPESNDS GHETLTDKLI
HLLRAVPDWA DEIKERGMQQ KRSLYTHEKW VEHRSSLRHV RHLLSSFSSR VILSLIPPVF
FFTSVAVVIA SYNSAVALDW LPGIFPILRS SSLPYQLTAP ALALLLVFRT EASYSRYEEG
RKAWVGIIAG TNDLARQVIC SVDSSGDELI IKDLLLRYIA AFPVALKCHV IYGSDIARDL
RNLIEADDLS LILQAKHRPR CVIEFISQSI QLLKLDDAKR DLLESKMLHL HEGIGVCEQL
MGIPIPLSYT RLTSRFLVFW HLTLPIILWD ECHWIVVPAT FISAASLFCI EEVGVLIEEP
FPMLALDELC DLVHSNIQEA VKSEKVIRNR IIAKIKLHEF KHSSNGRHRS
