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YXBC_BACSU
ID   YXBC_BACSU              Reviewed;         330 AA.
AC   P46327;
DT   01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT   01-NOV-1995, sequence version 1.
DT   03-AUG-2022, entry version 110.
DE   RecName: Full=Uncharacterized protein YxbC;
GN   Name=yxbC; Synonyms=yxaQ; OrderedLocusNames=BSU39880; ORFNames=VE7D;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168 / BGSC1A1;
RX   PubMed=7584049; DOI=10.1093/dnares/2.2.61;
RA   Yoshida K., Seki S., Fujimura M., Miwa Y., Fujita Y.;
RT   "Cloning and sequencing of a 36-kb region of the Bacillus subtilis genome
RT   between the gnt and iol operons.";
RL   DNA Res. 2:61-69(1995).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
RN   [3]
RP   X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS) IN COMPLEX WITH IRON IONS.
RG   Joint center for structural genomics (JCSG);
RT   "Crystal structure of putative asparaginyl hydroxylase (2636534) from
RT   Bacillus subtilis at 2.60 A resolution.";
RL   Submitted (MAR-2005) to the PDB data bank.
CC   -!- COFACTOR:
CC       Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC         Evidence={ECO:0000250|UniProtKB:P27431, ECO:0000305|Ref.3};
CC       Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000250|UniProtKB:P27431,
CC       ECO:0000305|Ref.3};
CC   -!- SIMILARITY: Belongs to the ROX family. {ECO:0000305}.
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DR   EMBL; AB005554; BAA21597.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB16024.1; -; Genomic_DNA.
DR   PIR; G70072; G70072.
DR   RefSeq; NP_391867.1; NC_000964.3.
DR   RefSeq; WP_003243554.1; NZ_JNCM01000034.1.
DR   PDB; 1VRB; X-ray; 2.60 A; A/B/C/D=1-330.
DR   PDBsum; 1VRB; -.
DR   AlphaFoldDB; P46327; -.
DR   SMR; P46327; -.
DR   STRING; 224308.BSU39880; -.
DR   PaxDb; P46327; -.
DR   PRIDE; P46327; -.
DR   EnsemblBacteria; CAB16024; CAB16024; BSU_39880.
DR   GeneID; 937640; -.
DR   KEGG; bsu:BSU39880; -.
DR   PATRIC; fig|224308.179.peg.4314; -.
DR   eggNOG; COG2850; Bacteria.
DR   InParanoid; P46327; -.
DR   OMA; HFDAYTN; -.
DR   PhylomeDB; P46327; -.
DR   BioCyc; BSUB:BSU39880-MON; -.
DR   EvolutionaryTrace; P46327; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR039994; JmjC_protein.
DR   PANTHER; PTHR13096; PTHR13096; 1.
DR   Pfam; PF08007; Cupin_4; 1.
DR   SMART; SM00558; JmjC; 1.
DR   PROSITE; PS51184; JMJC; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Iron; Metal-binding; Reference proteome.
FT   CHAIN           1..330
FT                   /note="Uncharacterized protein YxbC"
FT                   /id="PRO_0000050006"
FT   DOMAIN          96..256
FT                   /note="JmjC"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00538"
FT   BINDING         145
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /evidence="ECO:0000269|Ref.3"
FT   BINDING         147
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /evidence="ECO:0000269|Ref.3"
FT   BINDING         224
FT                   /ligand="Fe cation"
FT                   /ligand_id="ChEBI:CHEBI:24875"
FT                   /evidence="ECO:0000269|Ref.3"
FT   HELIX           10..13
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           18..24
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   TURN            25..28
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          31..33
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           37..42
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           47..49
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           52..58
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          63..65
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           68..71
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   TURN            72..75
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          81..83
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           85..93
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          98..100
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           103..105
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           109..120
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          129..136
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          144..146
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          148..158
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          160..165
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           187..192
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          204..210
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          215..218
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          223..227
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   STRAND          232..239
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           244..256
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           260..263
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           274..296
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           300..304
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   TURN            305..308
FT                   /evidence="ECO:0007829|PDB:1VRB"
FT   HELIX           313..325
FT                   /evidence="ECO:0007829|PDB:1VRB"
SQ   SEQUENCE   330 AA;  37458 MW;  E1B399E6EA67C006 CRC64;
     MSAVTESVLE SIISPVTMSE FLEEYWPVKP LVARGEVERF TSIPGFEKVR TLENVLAIYN
     NPVMVVGDAV IEESEGITDR FLVSPAEALE WYEKGAALEF DFTDLFIPQV RRWIEKLKAE
     LRLPAGTSSK AIVYAAKNGG GFKAHFDAYT NLIFQIQGEK TWKLAKNENV SNPMQHYDLS
     EAPYYPDDLQ SYWKGDPPKE DLPDAEIVNL TPGTMLYLPR GLWHSTKSDQ ATLALNITFG
     QPAWLDLMLA ALRKKLISDN RFRELAVNHQ SLHESSKSEL NGYLESLIQT LSENAETLTP
     EQIFQSQDSD FDPYQSTQLV FRQLLTSYKF
 
 
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