ZCH13_HUMAN
ID ZCH13_HUMAN Reviewed; 166 AA.
AC Q8WW36;
DT 10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Zinc finger CCHC domain-containing protein 13;
GN Name=ZCCHC13;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- INTERACTION:
CC Q8WW36; Q96NT3-2: GUCD1; NbExp=3; IntAct=EBI-954111, EBI-11978177;
CC Q8WW36; Q8IUQ4: SIAH1; NbExp=3; IntAct=EBI-954111, EBI-747107;
CC Q8WW36; P09012: SNRPA; NbExp=3; IntAct=EBI-954111, EBI-607085;
CC Q8WW36; P15622-3: ZNF250; NbExp=3; IntAct=EBI-954111, EBI-10177272;
CC Q8WW36; Q5T619: ZNF648; NbExp=3; IntAct=EBI-954111, EBI-11985915;
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DR EMBL; BC021176; AAH21176.1; -; mRNA.
DR CCDS; CCDS14425.1; -.
DR RefSeq; NP_976048.1; NM_203303.2.
DR AlphaFoldDB; Q8WW36; -.
DR BioGRID; 133309; 6.
DR IntAct; Q8WW36; 6.
DR STRING; 9606.ENSP00000345633; -.
DR iPTMnet; Q8WW36; -.
DR PhosphoSitePlus; Q8WW36; -.
DR BioMuta; ZCCHC13; -.
DR DMDM; 71152962; -.
DR MassIVE; Q8WW36; -.
DR PaxDb; Q8WW36; -.
DR PeptideAtlas; Q8WW36; -.
DR PRIDE; Q8WW36; -.
DR Antibodypedia; 28012; 78 antibodies from 16 providers.
DR DNASU; 389874; -.
DR Ensembl; ENST00000339534.4; ENSP00000345633.2; ENSG00000187969.6.
DR GeneID; 389874; -.
DR KEGG; hsa:389874; -.
DR MANE-Select; ENST00000339534.4; ENSP00000345633.2; NM_203303.3; NP_976048.1.
DR UCSC; uc004ebs.5; human.
DR CTD; 389874; -.
DR DisGeNET; 389874; -.
DR GeneCards; ZCCHC13; -.
DR HGNC; HGNC:31749; ZCCHC13.
DR HPA; ENSG00000187969; Tissue enriched (testis).
DR neXtProt; NX_Q8WW36; -.
DR OpenTargets; ENSG00000187969; -.
DR PharmGKB; PA134926925; -.
DR VEuPathDB; HostDB:ENSG00000187969; -.
DR eggNOG; KOG4400; Eukaryota.
DR GeneTree; ENSGT00950000183041; -.
DR HOGENOM; CLU_058879_4_0_1; -.
DR InParanoid; Q8WW36; -.
DR OMA; QKEQKCY; -.
DR OrthoDB; 1535084at2759; -.
DR PhylomeDB; Q8WW36; -.
DR TreeFam; TF316974; -.
DR PathwayCommons; Q8WW36; -.
DR SignaLink; Q8WW36; -.
DR BioGRID-ORCS; 389874; 15 hits in 691 CRISPR screens.
DR GenomeRNAi; 389874; -.
DR Pharos; Q8WW36; Tdark.
DR PRO; PR:Q8WW36; -.
DR Proteomes; UP000005640; Chromosome X.
DR RNAct; Q8WW36; protein.
DR Bgee; ENSG00000187969; Expressed in left testis and 12 other tissues.
DR Genevisible; Q8WW36; HS.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0045182; F:translation regulator activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:2000767; P:positive regulation of cytoplasmic translation; IBA:GO_Central.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF00098; zf-CCHC; 4.
DR SMART; SM00343; ZnF_C2HC; 6.
DR SUPFAM; SSF57756; SSF57756; 3.
DR PROSITE; PS50158; ZF_CCHC; 4.
PE 1: Evidence at protein level;
KW Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger.
FT CHAIN 1..166
FT /note="Zinc finger CCHC domain-containing protein 13"
FT /id="PRO_0000150974"
FT ZN_FING 4..21
FT /note="CCHC-type 1; degenerate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 45..62
FT /note="CCHC-type 2; degenerate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 65..82
FT /note="CCHC-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 89..106
FT /note="CCHC-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 110..127
FT /note="CCHC-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 128..145
FT /note="CCHC-type 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
SQ SEQUENCE 166 AA; 18005 MW; 40CC28B9FF3F64C3 CRC64;
MSSKDFFACG HSGHWARGCP RGGAGGRRGG GHGRGSQCGS TTLSYTCYCC GESGRNAKNC
VLLGNICYNC GRSGHIAKDC KDPKRERRQH CYTCGRLGHL ARDCDRQKEQ KCYSCGKLGH
IQKDCAQVKC YRCGEIGHVA INCSKARPGQ LLPLRQIPTS SQGMSQ