ZCHC8_XENLA
ID ZCHC8_XENLA Reviewed; 743 AA.
AC Q6DD45;
DT 10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 67.
DE RecName: Full=Zinc finger CCHC domain-containing protein 8;
DE AltName: Full=TRAMP-like complex RNA-binding factor ZCCHC8;
GN Name=zcchc8;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Scaffolding subunit of the trimeric nuclear exosome targeting
CC (NEXT) complex that is involved in the surveillance and turnover of
CC aberrant transcripts and non-coding RNAs. NEXT functions as an RNA
CC exosome cofactor that directs a subset of non-coding short-lived RNAs
CC for exosomal degradation. May be involved in pre-mRNA splicing. It is
CC required for 3'-end maturation of telomerase RNA component (TERC), TERC
CC 3'-end targeting to the nuclear RNA exosome, and for telomerase
CC function. {ECO:0000250|UniProtKB:Q6NZY4}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm
CC {ECO:0000250|UniProtKB:Q6NZY4}. Note=Excluded from nucleolus.
CC {ECO:0000250|UniProtKB:Q6NZY4}.
CC -!- SIMILARITY: Belongs to the ZCCHC8 family. {ECO:0000305}.
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DR EMBL; BC077784; AAH77784.1; -; mRNA.
DR RefSeq; NP_001086929.1; NM_001093460.1.
DR AlphaFoldDB; Q6DD45; -.
DR SMR; Q6DD45; -.
DR GeneID; 446764; -.
DR KEGG; xla:446764; -.
DR CTD; 446764; -.
DR Xenbase; XB-GENE-977405; zcchc8.L.
DR Proteomes; UP000186698; Chromosome 1L.
DR Bgee; 446764; Expressed in blastula and 19 other tissues.
DR GO; GO:0005654; C:nucleoplasm; ISS:UniProtKB.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0034470; P:ncRNA processing; ISS:UniProtKB.
DR InterPro; IPR006568; PSP_pro-rich.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR Pfam; PF04046; PSP; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00581; PSP; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..743
FT /note="Zinc finger CCHC domain-containing protein 8"
FT /id="PRO_0000150964"
FT ZN_FING 213..230
FT /note="CCHC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 390..432
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 449..518
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 540..566
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 600..649
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 662..700
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 29..67
FT /evidence="ECO:0000255"
FT COMPBIAS 393..431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 455..509
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 662..681
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 743 AA; 82944 MW; A09876C016CCF491 CRC64;
MAEVDFGDTE LFEQLDGDLP ASSVHVRFDS EGEANDVQEL VSQHEETINR LSAENQELKR
RLSLLNRPSG LPVEDKLDGP LLQILFMNHI ISKQYHQEIE EFITSLFQKY EEHRKSNSEK
TSFNIKPQPS SILLEENDDS DADTMKNIKQ AFSVVGSVQY FKNFCLDKLG QPLLNENPQL
TEGWDIPKYQ QVFTQIVSLD GQEIQVKAKR PKPCCFNCGS EEHQMRDCPK PRDQAHINMK
RKEFLDACGE AGNQNQQRYH AEEVEERFGK YKPGVISEEL QEALGIMDKN LPPFIYRMRE
LGYPPGWLKE AELENSGLSL YDGKERLDAS DGEIEDRDTE AKKHVSYDVS KLVNYPGFNI
SAPPDMFDEW QMFGSIPMQQ AHQKDIFANY LTDSFPPGSS NKSNKRSSCQ SSSSERKRQK
TSGNHTVTSA VMDMDMESDE DMYHSRASKG YMFHPPLPPG SPSYGTPPPL PRGTPPSTPP
NFIPPPPPTP TPPPLPKGTP PPTPNRDSPK VPPQVLDEDT WTLEELEEKQ RLLWAQLDNG
ESTNSDCDAH TPITVSSVTS SPSRTELDIA TGRKAAPRQT AHELKSPCVI TKLFVAEPEE
GGPLIPEEGG PLIPEEGGPL IPEEGGPLIP EEGGPLIPEE DSETNEDSNE CYVVEGNDIE
VNKLSSKHEN ASEKNPSDED ATEEAACVEP SPKRSGVPDV SKFAEGITPF EYDNMSDSTG
VYLRLRGLLK NSPRNVQKSK KQV