ZCRB1_RAT
ID ZCRB1_RAT Reviewed; 217 AA.
AC Q499V6;
DT 17-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Zinc finger CCHC-type and RNA-binding motif-containing protein 1;
DE AltName: Full=U11/U12 small nuclear ribonucleoprotein 31 kDa protein;
DE Short=U11/U12 snRNP 31 kDa protein;
GN Name=Zcrb1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Prostate;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBUNIT: Component of the U11/U12 snRNPs that are part of the U12-type
CC spliceosome. Interacts with ZRSR1 (By similarity). {ECO:0000250,
CC ECO:0000250|UniProtKB:Q9CZ96}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleoplasm {ECO:0000250}.
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DR EMBL; BC099747; AAH99747.1; -; mRNA.
DR RefSeq; NP_001030112.1; NM_001034940.1.
DR AlphaFoldDB; Q499V6; -.
DR SMR; Q499V6; -.
DR STRING; 10116.ENSRNOP00000006780; -.
DR iPTMnet; Q499V6; -.
DR PhosphoSitePlus; Q499V6; -.
DR PaxDb; Q499V6; -.
DR PRIDE; Q499V6; -.
DR GeneID; 362990; -.
DR KEGG; rno:362990; -.
DR CTD; 85437; -.
DR RGD; 1309851; Zcrb1.
DR VEuPathDB; HostDB:ENSRNOG00000004996; -.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_059455_1_0_1; -.
DR InParanoid; Q499V6; -.
DR OMA; RXVTIMK; -.
DR OrthoDB; 1422822at2759; -.
DR PhylomeDB; Q499V6; -.
DR TreeFam; TF106263; -.
DR Reactome; R-RNO-72165; mRNA Splicing - Minor Pathway.
DR PRO; PR:Q499V6; -.
DR Proteomes; UP000002494; Chromosome 7.
DR Bgee; ENSRNOG00000004996; Expressed in quadriceps femoris and 19 other tissues.
DR Genevisible; Q499V6; RN.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005689; C:U12-type spliceosomal complex; ISO:RGD.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd12393; RRM_ZCRB1; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR003954; RRM_dom_euk.
DR InterPro; IPR044598; ZCRB1.
DR InterPro; IPR034219; ZCRB1_RRM.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR46259; PTHR46259; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00361; RRM_1; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF54928; SSF54928; 1.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein;
KW Reference proteome; RNA-binding; Spliceosome; Zinc; Zinc-finger.
FT CHAIN 1..217
FT /note="Zinc finger CCHC-type and RNA-binding motif-
FT containing protein 1"
FT /id="PRO_0000252375"
FT DOMAIN 10..88
FT /note="RRM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT ZN_FING 105..122
FT /note="CCHC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 120..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 148..163
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..217
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 155
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q8TBF4"
FT MOD_RES 210
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q8TBF4"
FT MOD_RES 216
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q8TBF4"
SQ SEQUENCE 217 AA; 24545 MW; 7397DA5B216E5D06 CRC64;
MSGGLAPSKS TVYVSNLPFS LTNNDLYRIF SKYGKVVKVT IMKDKDTRKS KGVAFILFLD
KDSALNCTRA INNKQLFGRV IKASIAIDNG RAAEFIRRRN YFDKSKCYEC GESGHLSYAC
PKNMLGEREP PKKKEKKKKK KVPEPEEEIE EVEVSEEEGE DPALDSLSQA IAFQQAKIEE
EQNKWRPSTG GPSTSDDSRR PRIKKSAYFS DEEELSD