ZGPAT_DANRE
ID ZGPAT_DANRE Reviewed; 504 AA.
AC Q7SXW2;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Zinc finger CCCH-type with G patch domain-containing protein;
GN Name=zgpat; ORFNames=zgc:63730;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=AB;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription repressor that specifically binds the 5'-
CC GGAG[GA]A[GA]A-3' consensus sequence. Represses transcription by
CC recruiting the chromatin multiprotein complex NuRD to target promoters.
CC Negatively regulates expression of EGFR, a gene involved in cell
CC proliferation, survival and migration (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; BC055224; AAH55224.1; -; mRNA.
DR RefSeq; NP_956779.1; NM_200485.1.
DR AlphaFoldDB; Q7SXW2; -.
DR SMR; Q7SXW2; -.
DR STRING; 7955.ENSDARP00000030077; -.
DR PaxDb; Q7SXW2; -.
DR Ensembl; ENSDART00000037474; ENSDARP00000030077; ENSDARG00000027403.
DR Ensembl; ENSDART00000190410; ENSDARP00000153327; ENSDARG00000027403.
DR GeneID; 393457; -.
DR KEGG; dre:393457; -.
DR CTD; 84619; -.
DR ZFIN; ZDB-GENE-040426-1248; zgpat.
DR eggNOG; KOG2185; Eukaryota.
DR GeneTree; ENSGT00390000000732; -.
DR HOGENOM; CLU_040504_1_0_1; -.
DR InParanoid; Q7SXW2; -.
DR OMA; QYTRGIG; -.
DR OrthoDB; 1238995at2759; -.
DR PhylomeDB; Q7SXW2; -.
DR TreeFam; TF105970; -.
DR PRO; PR:Q7SXW2; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 11.
DR Bgee; ENSDARG00000027403; Expressed in blastula and 27 other tissues.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
DR GO; GO:0007175; P:negative regulation of epidermal growth factor-activated receptor activity; ISS:UniProtKB.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd04508; TUDOR; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR043560; ZGPAT.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR46297; PTHR46297; 1.
DR Pfam; PF01585; G-patch; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; SSF90229; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..504
FT /note="Zinc finger CCCH-type with G patch domain-containing
FT protein"
FT /id="PRO_0000385193"
FT DOMAIN 308..354
FT /note="G-patch"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00092"
FT ZN_FING 165..191
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 95..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 504 AA; 55727 MW; BBD97F858FB2CACD CRC64;
MDESSLEEAI GTYRAQLQQV ELALSAGLGS AEQDDLLKLK EDLQQLIELT ESSLVSVKKS
QLLAALEEAS TNQSDTSVPQ ETALDNEFAA FYAELSEDSN EVKPNPDTDE ENEEEEQDIS
GTKVCAPYRT SWGTLEYHNA MVVCPEEPEG EEARVRVFYI HPTHKSMKPC GFYLEGKCRF
MDNCRYSHGE VVCVSELRDF LEADISNMES GSACLAKHED GIWYPARISE IEGGFYTVKF
DSLLLKEAVL EADGIIPPLR QDDVSSSSSS DSEDDAECDG GYAKVFTSRE EDLAQVNTAE
FCGWEAHTRG IGSKLLMKMG YELGKGLGKT LSGRVEPVQA VVLPKGHSLD ICAELTQRKT
AAAIAKNNPT SHKRKAKKKK ASTSTRHNVF DFLNSKLGDR AQSASHSSSS LVTGAEAYRG
GKSTKRSLNV RLFEAAEKVT QVEREIQQLT KSLSKRNGRD AAVVSRLEEK LAASRKLLEQ
LKAQEQAIQR EQKKADTHKK MTEF