ZGPAT_XENLA
ID ZGPAT_XENLA Reviewed; 524 AA.
AC Q5U4Z3;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 07-DEC-2004, sequence version 1.
DT 25-MAY-2022, entry version 70.
DE RecName: Full=Zinc finger CCCH-type with G patch domain-containing protein;
GN Name=zgpat;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Liver;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription repressor that specifically binds the 5'-
CC GGAG[GA]A[GA]A-3' consensus sequence. Represses transcription by
CC recruiting the chromatin multiprotein complex NuRD to target promoters.
CC Negatively regulates expression of EGFR, a gene involved in cell
CC proliferation, survival and migration (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; BC084897; AAH84897.1; -; mRNA.
DR RefSeq; NP_001088537.1; NM_001095068.1.
DR AlphaFoldDB; Q5U4Z3; -.
DR SMR; Q5U4Z3; -.
DR DNASU; 495411; -.
DR GeneID; 495411; -.
DR KEGG; xla:495411; -.
DR CTD; 495411; -.
DR Xenbase; XB-GENE-6253853; zgpat.L.
DR Proteomes; UP000186698; Chromosome 9_10L.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
DR GO; GO:0007175; P:negative regulation of epidermal growth factor-activated receptor activity; ISS:UniProtKB.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
DR CDD; cd04508; TUDOR; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR043560; ZGPAT.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR46297; PTHR46297; 1.
DR Pfam; PF01585; G-patch; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; SSF90229; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..524
FT /note="Zinc finger CCCH-type with G patch domain-containing
FT protein"
FT /id="PRO_0000385195"
FT DOMAIN 326..372
FT /note="G-patch"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00092"
FT ZN_FING 184..210
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 105..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 278..298
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 375..402
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 500..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..136
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..392
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 524 AA; 57880 MW; C750372DF9916F46 CRC64;
MDEESLAAAL QTYRAQLEQV DLTLRAVTDP TQLEDLTQLH TDLQQLIELT ESSLLSIQKC
NLLTSLEGNP SLPFHEDPIS LPALEVPTSL SSQDKEYEAF RMAISEESQP LGSNDETSTC
SKGSEEEEEE EEEEEDNTSG MKVKAPYYST WGTLEYHNAM VVGSEQMEDG EAGVRVLYLY
PTHKAMKPCP FFLDGKCLFN DNCRFSHGQV VSVTELQPFK EADLGSLAVD SPCLAQHNDG
IWYPARITDI ESGFYTVKFD SLLLKESVLE ADSIIPPLRG SDSSSSSSSD EEEDGAAEDS
VYAKVLGQEI AGTTCSSEFG GWEAHTRGIG SKLLVRMGYE FGKGLGRNAE GRVEPIQAVV
LPKGKSLDQC MEIQQRKKAG GKHKHKTSKR RPKASGQGGG AKARDIFDFL NEKLEGKFTS
ACTAETQKTG EKKGKELYNA SKDSKRALSV QVAITAEKIK QKQREICHLK ESLARNAGRE
SVISNQLEVR LSGARKELAG LQQEERSLQR EQKKADTHKK MTEF