ZIP4L_ORYSI
ID ZIP4L_ORYSI Reviewed; 953 AA.
AC A2WXU2;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 25-MAY-2022, entry version 65.
DE RecName: Full=TPR repeat-containing protein ZIP4 {ECO:0000305};
DE AltName: Full=Protein ZIP4 homolog {ECO:0000305};
GN Name=ZIP4 {ECO:0000305}; ORFNames=OsI_04745 {ECO:0000312|EMBL:EAY76788.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Required for crossover formation, complete synapsis of
CC homologous chromosomes and bivalent formation during meiosis. Is
CC specific to recombination events resulting in interference-sensitive
CC crossovers (class I meiotic crossover) and works cooperatively with
CC MER3 to promote crossovers. {ECO:0000250|UniProtKB:Q5N829}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q5N829}.
CC Chromosome {ECO:0000250|UniProtKB:Q5N829}. Note=Detected in punctuate
CC foci onto the chromosomes in prophase I meiocytes.
CC {ECO:0000250|UniProtKB:Q5N829}.
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DR EMBL; CM000126; EAY76788.1; -; Genomic_DNA.
DR AlphaFoldDB; A2WXU2; -.
DR STRING; 39946.A2WXU2; -.
DR EnsemblPlants; BGIOSGA004961-TA; BGIOSGA004961-PA; BGIOSGA004961.
DR Gramene; BGIOSGA004961-TA; BGIOSGA004961-PA; BGIOSGA004961.
DR HOGENOM; CLU_307264_0_0_1; -.
DR OMA; SMDFKEV; -.
DR Proteomes; UP000007015; Chromosome 1.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0007143; P:female meiotic nuclear division; IEA:EnsemblPlants.
DR GO; GO:0007140; P:male meiotic nuclear division; IEA:EnsemblPlants.
DR GO; GO:0000712; P:resolution of meiotic recombination intermediates; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; -; 2.
DR InterPro; IPR013940; Spo22/ZIP4/TEX11.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF08631; SPO22; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
PE 3: Inferred from homology;
KW Chromosome; Meiosis; Nucleus; Reference proteome; Repeat; TPR repeat.
FT CHAIN 1..953
FT /note="TPR repeat-containing protein ZIP4"
FT /id="PRO_0000432121"
FT REPEAT 129..162
FT /note="TPR 1"
FT /evidence="ECO:0000255"
FT REPEAT 432..465
FT /note="TPR 2"
FT /evidence="ECO:0000255"
FT REPEAT 473..506
FT /note="TPR 3"
FT /evidence="ECO:0000255"
FT REGION 248..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 924..953
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 939..953
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 953 AA; 102598 MW; AD979BCF02F00950 CRC64;
MKISELSPEY RQPPPHAGLI ADLSKAVSDV ESFAASATAP EKLAADLRRI LTSLASAASS
SSFTESLSVQ IWRLGTRLWN AVVDRANSAA LAGGPAALAV EAEIRQAAPE LLLLAGIPNG
VPSAAAKVAS FFHRSGLAWL DLGRVDLASA CFEKATPLVS AAATEDRGVL LELNLARARA
ASDAGDQALA VALLSRSKPL AAASPEGAKS LAQGYLSIGE ATLAAKHSNP AVEASTLFTE
ALDLCEKAAS PSSSSPRTPP YGGATPKTPN LEGLKRRCLR FLALERLQAQ DYEGVLRCIR
VSRASMGLEE EHPSIGVMAM RAWIGSGNMA EADKELERLM ANALATENLC VSAAEAYLAA
AGPEAARKVL IALAARCRAG GAAAAVRVVK QVIDGGGGGI GRARAIAELV SDERVVALFD
GPGNTHERGT MHALLWNCGT EHFRAKNYDT SADLIERSML YVSRDEESRS RRADCFRVLS
ICHIALQHLD RALEFVNEAY KVEPNIKCAF LKVKINLQKG EEDEAFKQMK TMVGCVDFNP
EFLTLTAHEA MSCKSFGVAV ASLSYLLGLY SAERPMPMPE VAVLRNLIEL LSREPGTEAE
ILKYSRRAKQ RMADLGVESF FGSGIVGGRE LNWFADLSWN MGLRASKEKK YNFGSEFFEL
AAEFFSSRNA ECDENRSKVC KALIMAVTIM LNAEELNNSP LSDSDIKKGV EMLSRAGKLL
PLISPSVPVA SDQLEANNFL YLHTFNSYQL MGRMGTPAHP QQLQLIKNFA SSKACTPANL
LTLGVTASKG ALPNMLAAEF SLKACITTAL ASQSPNYRVI SCALRKLACL AGLQDLNGSK
SDAAYDVFQQ AYQIVVGLKE GEYPVEEGQW LVATAWNMSC LPLRLHQAKV ARKWMKMGLD
LARHLEGMKE RIASMQTTFE NLERVSGDEP DECSQEEAPK ASISGSMSQP VLV
