ZMAT5_BOVIN
ID ZMAT5_BOVIN Reviewed; 170 AA.
AC Q2TA39;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Zinc finger matrin-type protein 5;
DE AltName: Full=U11/U12 small nuclear ribonucleoprotein 20 kDa protein;
DE Short=U11/U12 snRNP 20 kDa protein;
GN Name=ZMAT5;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Crossbred X Angus; TISSUE=Liver;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Component of the U11/U12 snRNPs that are part of the U12-type
CC spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; BC111131; AAI11132.1; -; mRNA.
DR RefSeq; NP_001033299.1; NM_001038210.2.
DR RefSeq; XP_005218156.1; XM_005218099.3.
DR AlphaFoldDB; Q2TA39; -.
DR SMR; Q2TA39; -.
DR STRING; 9913.ENSBTAP00000023779; -.
DR PaxDb; Q2TA39; -.
DR PRIDE; Q2TA39; -.
DR Ensembl; ENSBTAT00000023779; ENSBTAP00000023779; ENSBTAG00000017890.
DR GeneID; 616095; -.
DR KEGG; bta:616095; -.
DR CTD; 55954; -.
DR VEuPathDB; HostDB:ENSBTAG00000017890; -.
DR VGNC; VGNC:37194; ZMAT5.
DR eggNOG; KOG3454; Eukaryota.
DR GeneTree; ENSGT00390000009869; -.
DR HOGENOM; CLU_100385_1_0_1; -.
DR InParanoid; Q2TA39; -.
DR OMA; WPPIQEL; -.
DR OrthoDB; 1541869at2759; -.
DR TreeFam; TF332784; -.
DR Proteomes; UP000009136; Chromosome 17.
DR Bgee; ENSBTAG00000017890; Expressed in laryngeal cartilage and 103 other tissues.
DR ExpressionAtlas; Q2TA39; baseline and differential.
DR GO; GO:0005689; C:U12-type spliceosomal complex; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR013085; U1-CZ_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR Pfam; PF00642; zf-CCCH; 1.
DR Pfam; PF06220; zf-U1; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF57667; SSF57667; 1.
DR SUPFAM; SSF90229; SSF90229; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Spliceosome; Zinc; Zinc-finger.
FT CHAIN 1..170
FT /note="Zinc finger matrin-type protein 5"
FT /id="PRO_0000254113"
FT ZN_FING 51..79
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 150..170
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 170 AA; 19852 MW; BA939A12E513B2EE CRC64;
MGKRYFCDYC DRSFQDNLHN RKKHLNGLQH LKAKKLWYDM FRDAAAILLD EQNKRPCRKF
LLTGQCDFGS NCRFSHMSER DLQELSVQVE EERRAREWPL DVAELPEVCL EDWLEKRAKR
LSSAPSSRAE PVRATVFQYP VGWPPVQELP PSLRAPPPGG WPLQPSVQWG