ZMAT5_DANRE
ID ZMAT5_DANRE Reviewed; 173 AA.
AC Q6AXL8;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Zinc finger matrin-type protein 5;
DE AltName: Full=U11/U12 small nuclear ribonucleoprotein 20 kDa protein;
DE Short=U11/U12 snRNP 20 kDa protein;
GN Name=zmat5; ORFNames=zgc:101022;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Component of the U11/U12 snRNPs that are part of the U12-type
CC spliceosome. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC079486; AAH79486.1; -; mRNA.
DR RefSeq; NP_001003771.1; NM_001003771.1.
DR AlphaFoldDB; Q6AXL8; -.
DR SMR; Q6AXL8; -.
DR STRING; 7955.ENSDARP00000117835; -.
DR PaxDb; Q6AXL8; -.
DR PRIDE; Q6AXL8; -.
DR GeneID; 445314; -.
DR KEGG; dre:445314; -.
DR CTD; 55954; -.
DR ZFIN; ZDB-GENE-040808-31; zmat5.
DR eggNOG; KOG3454; Eukaryota.
DR InParanoid; Q6AXL8; -.
DR OrthoDB; 1541869at2759; -.
DR PhylomeDB; Q6AXL8; -.
DR Reactome; R-DRE-72165; mRNA Splicing - Minor Pathway.
DR PRO; PR:Q6AXL8; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005689; C:U12-type spliceosomal complex; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR013085; U1-CZ_Znf_C2H2.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR Pfam; PF06220; zf-U1; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF57667; SSF57667; 1.
DR SUPFAM; SSF90229; SSF90229; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 2: Evidence at transcript level;
KW Metal-binding; mRNA processing; mRNA splicing; Nucleus; Reference proteome;
KW Spliceosome; Zinc; Zinc-finger.
FT CHAIN 1..173
FT /note="Zinc finger matrin-type protein 5"
FT /id="PRO_0000254116"
FT ZN_FING 51..79
FT /note="C3H1-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00723"
FT REGION 83..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 173 AA; 20310 MW; 49F19906834B844C CRC64;
MGKRYYCDYC DRSFQDNLHN RKKHLNGVQH HRAKKAWFDN FRDAATLLND ERSKEVCRKF
VQTGQCVFGT SCRFSHMSEK QMKMLEQKID DEKRQKEDPD QDGSSERSVD EWLSRREKKL
AALTSGRVLR MEEEECTENI EIPPYLLSIP DLPPSLHPPP AGGWRVTVHN EWG