ZMYM5_BOVIN
ID ZMYM5_BOVIN Reviewed; 673 AA.
AC A6QPH9; Q1JQB9;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 22-JUL-2008, sequence version 2.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Zinc finger MYM-type protein 5;
GN Name=ZMYM5;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Fetal cerebellum, and Hippocampus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functions as a transcriptional regulator.
CC {ECO:0000250|UniProtKB:Q9UJ78}.
CC -!- SUBUNIT: Interacts (via N-terminal 120 amino acid region) with ETV5
CC (via C-terminal). {ECO:0000250|UniProtKB:Q9UJ78}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI49332.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};
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DR EMBL; BC149331; AAI49332.1; ALT_SEQ; mRNA.
DR EMBL; BC116071; AAI16072.1; -; mRNA.
DR RefSeq; NP_001181947.1; NM_001195018.1.
DR RefSeq; XP_005213843.1; XM_005213786.3.
DR RefSeq; XP_005213844.1; XM_005213787.3.
DR RefSeq; XP_005213845.1; XM_005213788.2.
DR AlphaFoldDB; A6QPH9; -.
DR SMR; A6QPH9; -.
DR STRING; 9913.ENSBTAP00000009433; -.
DR PaxDb; A6QPH9; -.
DR PRIDE; A6QPH9; -.
DR Ensembl; ENSBTAT00000009433; ENSBTAP00000009433; ENSBTAG00000007167.
DR GeneID; 536389; -.
DR KEGG; bta:536389; -.
DR CTD; 9205; -.
DR VEuPathDB; HostDB:ENSBTAG00000007167; -.
DR VGNC; VGNC:56647; ZMYM5.
DR eggNOG; ENOG502S9U9; Eukaryota.
DR GeneTree; ENSGT00940000162379; -.
DR HOGENOM; CLU_026638_1_0_1; -.
DR InParanoid; A6QPH9; -.
DR OMA; EHCGEYM; -.
DR OrthoDB; 537563at2759; -.
DR TreeFam; TF336988; -.
DR Proteomes; UP000009136; Chromosome 12.
DR Bgee; ENSBTAG00000007167; Expressed in oocyte and 104 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:Ensembl.
DR InterPro; IPR011017; TRASH_dom.
DR InterPro; IPR010507; Znf_MYM.
DR InterPro; IPR006580; Znf_TTF.
DR Pfam; PF06467; zf-FCS; 3.
DR SMART; SM00746; TRASH; 3.
DR SMART; SM00597; ZnF_TTF; 1.
PE 2: Evidence at transcript level;
KW Isopeptide bond; Metal-binding; Nucleus; Reference proteome; Repeat;
KW Transcription; Transcription regulation; Ubl conjugation; Zinc;
KW Zinc-finger.
FT CHAIN 1..673
FT /note="Zinc finger MYM-type protein 5"
FT /id="PRO_0000343661"
FT ZN_FING 266..300
FT /note="MYM-type 1"
FT ZN_FING 312..352
FT /note="MYM-type 2; degenerate"
FT ZN_FING 359..394
FT /note="MYM-type 3"
FT ZN_FING 405..432
FT /note="MYM-type 4"
FT REGION 190..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CROSSLNK 92
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
FT CROSSLNK 167
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
FT CROSSLNK 226
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
FT CROSSLNK 456
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
FT CROSSLNK 463
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
FT CROSSLNK 552
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:Q9UJ78"
SQ SEQUENCE 673 AA; 74835 MW; CE7C192666EB55B0 CRC64;
MGECSAGRLD LTEQTPILLG SKAMAASLMD VGDSFGDPAS PLVNRSRNSL VEGDNGDDDD
VVFIESIQPP SSSAPVIADQ RHFVFPASRN KKLQGHYSVI LPSSRYLASQ KGNTSETIVI
DDEEDMETNG REKTVSSSFI EWGFPGTKNR TKDLDFSTSS LSRSKTKTAV GPFNPGRMNV
AGGEFQNGGF TTHHSPDSWI SQSASFPRNQ KQPGVDSLSP VASLPKQIFQ SSAQQQPTKA
AKITCANCKK PLQKGQTAYQ RKGSAHLFCS TTCLSSFSHK RTPKKRNVTC KKDAPTKKAT
VVPQGESSEP FPKCFSTSHL SPYEDSQNLR KRVLNKSRCT ICNKLTEIRH EVSVNNVTHK
LCSNQCFNKY RLANGLVMNC CEQCGEYLPG KGAGNNVLVI EGQQMRFCCQ SCVNEYKQMI
ETNLKKILAS ENRKRNAVGE ENERELYGSL NILPEKTEEI PEKKEKTSEL QVSAECSLDA
SVVQQNVNLP PSVSDIADKL QEQLGEKPSE DSIIPAVLSA DPGTWPRILS IKQRDTLVEN
DPPQVRNFNF PKDSTGRKFS ETYYTRILAN GEKTTRSWLL YSTSKDSVFC LYCKLFGEGK
NQLKNENGCR DWQHLSHILS KHEESEMHIN NSVKYSKLKS DLKTSKIVEA SEHRLQEREG
KDGVKLLYTL DLI