ZN143_BOVIN
ID ZN143_BOVIN Reviewed; 613 AA.
AC A6QQW0;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Zinc finger protein 143;
DE AltName: Full=Selenocysteine tRNA gene transcription-activating factor;
GN Name=ZNF143; Synonyms=STAF;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Thymus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcriptional activator. Activates the gene for
CC selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear
CC RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase
CC III transcription via its interaction with CHD8 (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Interacts with CHD8. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the GLI C2H2-type zinc-finger protein family.
CC {ECO:0000305}.
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DR EMBL; BC150013; AAI50014.1; -; mRNA.
DR RefSeq; NP_001095624.1; NM_001102154.1.
DR AlphaFoldDB; A6QQW0; -.
DR SMR; A6QQW0; -.
DR STRING; 9913.ENSBTAP00000021394; -.
DR PaxDb; A6QQW0; -.
DR PRIDE; A6QQW0; -.
DR Ensembl; ENSBTAT00000064671; ENSBTAP00000054556; ENSBTAG00000016074.
DR GeneID; 533243; -.
DR KEGG; bta:533243; -.
DR CTD; 7702; -.
DR VEuPathDB; HostDB:ENSBTAG00000016074; -.
DR VGNC; VGNC:58348; ZNF143.
DR eggNOG; KOG1721; Eukaryota.
DR GeneTree; ENSGT00940000157584; -.
DR InParanoid; A6QQW0; -.
DR OrthoDB; 1318335at2759; -.
DR Proteomes; UP000009136; Chromosome 15.
DR Bgee; ENSBTAG00000016074; Expressed in oocyte and 106 other tissues.
DR ExpressionAtlas; A6QQW0; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 5.
DR SMART; SM00355; ZnF_C2H2; 7.
DR SUPFAM; SSF57667; SSF57667; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 7.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 7.
PE 2: Evidence at transcript level;
KW Acetylation; Activator; DNA-binding; Isopeptide bond; Metal-binding;
KW Nucleus; Phosphoprotein; Reference proteome; Repeat; Transcription;
KW Transcription regulation; Ubl conjugation; Zinc; Zinc-finger.
FT CHAIN 1..613
FT /note="Zinc finger protein 143"
FT /id="PRO_0000370717"
FT ZN_FING 212..236
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 242..266
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 272..296
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 302..326
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 332..356
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 362..386
FT /note="C2H2-type 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 392..415
FT /note="C2H2-type 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT MOD_RES 1
FT /note="N-acetylmethionine"
FT /evidence="ECO:0000250|UniProtKB:P52747"
FT MOD_RES 327
FT /note="Phosphothreonine"
FT /evidence="ECO:0000250|UniProtKB:P52747"
FT CROSSLNK 188
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P52747"
FT CROSSLNK 381
FT /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT G-Cter in SUMO2)"
FT /evidence="ECO:0000250|UniProtKB:P52747"
SQ SEQUENCE 613 AA; 66079 MW; 2AA5227B8D7F372B CRC64;
MLLAQINRDS QGMTEFPGGG MEAQHVTLCL TEAVTVADGD NLENMEGVSL QAVTLADGST
AYIQHNSKDG SAAYVQHVPI PKTTGDSLRL EDGQAVQLED SYDQSALQAV QLEDGTTAYI
HHAVQVPQSD TILAIQADGT VAGLHTGDAA IDPDTISALE QYAAKVSIDG SEGVTGSGII
GENEQEKKMQ IVLQGHATRV TAKSQQSGEK AFRCGYDGCG KLYTTAHHLK VHERSHTGDR
PYQCEHAGCG KAFATGYGLK SHVRTHTGEK PYRCSEDNCT KSFKTSGDLQ KHIRTHTGER
PFKCHFEGCG RSFTTSNIRK VHIRTHTGER PYYCTEPGCG RAFASATNYK NHVRIHTGEK
PYVCTVPGCD KRFTEYSSLY KHHVVHTHSK PYNCNHCGKT YKQISTLAMH KRTAHNDTEP
IEEEQEAFFE PPPGQGEDVL KGSQITYVTG VEGDDVVSTQ VATVTQSGLS QQVTLISQDG
TQHVNISQAD MQAIGNTITM VTQDGTPITV PAHDAVISSA GAHSVAMVTA EGTEGQQVAI
VAQDLAAFHT ASSEMGHQQH SHHLVTTETR PLTLVATSNG TQIAVQLGEQ PSLEEAIRIA
SRIQQGETPG LDD