ZN143_XENTR
ID ZN143_XENTR Reviewed; 567 AA.
AC Q58DZ6;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-MAY-2009, sequence version 2.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Zinc finger protein 143;
DE AltName: Full=Selenocysteine tRNA gene transcription-activating factor;
GN Name=znf143; Synonyms=staf;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcriptional activator. Activates the gene for
CC selenocysteine tRNA (tRNAsec). Binds to the activator element (AE)
CC motif of the selenocysteine tRNA gene promoter (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the GLI C2H2-type zinc-finger protein family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAH92134.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; BC092134; AAH92134.1; ALT_INIT; mRNA.
DR RefSeq; NP_001025654.1; NM_001030483.1.
DR AlphaFoldDB; Q58DZ6; -.
DR SMR; Q58DZ6; -.
DR PRIDE; Q58DZ6; -.
DR DNASU; 595042; -.
DR GeneID; 595042; -.
DR KEGG; xtr:595042; -.
DR CTD; 7702; -.
DR Xenbase; XB-GENE-1012504; znf143.
DR HOGENOM; CLU_027168_0_0_1; -.
DR InParanoid; Q58DZ6; -.
DR OrthoDB; 1318335at2759; -.
DR Reactome; R-XTR-6807505; RNA polymerase II transcribes snRNA genes.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000024199; Expressed in 2-cell stage embryo and 13 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00096; zf-C2H2; 6.
DR SMART; SM00355; ZnF_C2H2; 7.
DR SUPFAM; SSF57667; SSF57667; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 7.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 7.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..567
FT /note="Zinc finger protein 143"
FT /id="PRO_0000370720"
FT ZN_FING 230..254
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 260..284
FT /note="C2H2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 290..314
FT /note="C2H2-type 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 320..344
FT /note="C2H2-type 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 350..374
FT /note="C2H2-type 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 380..404
FT /note="C2H2-type 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 410..433
FT /note="C2H2-type 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 506..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 567 AA; 61601 MW; 863608551D7AC4A2 CRC64;
MLLAQINRDS QAMAEFPGGG GEAQHVTLCL TEAVADGESM DTMEGMSLQA VTLADGSTAY
IQHNTKDGKL MEGQVIQLED GSAAYVQHVP KGDDLSLEDG QAVQLEDGTT AYIHHSSKDS
YDQSSVQAVQ LEDGTTAYIH HAVQVPQSDT ILAIQADGTV AGLHTGEASI DPDTISALEQ
YAAKVSIEGG EGAGSNALIN ESESEKKMQI VLSHGSRIPA KPPQTNEKAF RCDYEGCGKL
YTTAHHLKVH ERSHTGDRPY QCDHGGCRKA FATGYGLKSH VRTHTGEKPY RCSEENCTKS
FKTSGDLQKH VRTHTGERPF KCPFEGCGRS FTTSNIRKVH IRTHTGERPY YCSEPGCGRA
FASATNYKNH VRIHTGEKPY VCTVPGCDKR FTEYSSLYKH HVVHTHSKPY NCNHCGKTYK
QISTLAMHKR TAHNDTEPIE EEQESFFVPQ PPDEVIKGSQ ITYVTGVDGE DGIQTTQSGQ
QLALIAQDGT SHVAIVAQDL SAFHTSATES GPQHSHNLGG SESRPVTLLA TSNGRQIAVQ
IGEQQSLEEA IRIASRIQQG ESPGIED