ZN346_XENTR
ID ZN346_XENTR Reviewed; 354 AA.
AC B0JZ85;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 2.
DT 03-AUG-2022, entry version 55.
DE RecName: Full=Zinc finger protein 346 {ECO:0000250|UniProtKB:Q9R0B7};
DE AltName: Full=Just another zinc finger protein {ECO:0000250|UniProtKB:Q9R0B7};
DE Short=Protein jaz;
GN Name=znf346 {ECO:0000250|UniProtKB:Q9R0B7};
GN Synonyms=jaz {ECO:0000250|UniProtKB:Q8AVN9};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1] {ECO:0000312|EMBL:AAI59077.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo {ECO:0000312|EMBL:AAI59077.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds preferentially to dsRNA, but also to RNA-DNA hybrids.
CC {ECO:0000250|UniProtKB:Q8AVN9}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q8AVN9}. Cytoplasm
CC {ECO:0000250|UniProtKB:Q8AVN9}. Note=Primarily nuclear.
CC {ECO:0000250|UniProtKB:Q8AVN9}.
CC -!- DOMAIN: The zinc-finger domains are required for binding to dsRNA, and
CC also for nuclear localization. {ECO:0000250|UniProtKB:Q9R0B7}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI59077.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; BC159076; AAI59077.1; ALT_INIT; mRNA.
DR RefSeq; XP_002936996.2; XM_002936950.2.
DR AlphaFoldDB; B0JZ85; -.
DR SMR; B0JZ85; -.
DR Ensembl; ENSXETT00000056332; ENSXETP00000056332; ENSXETG00000007230.
DR GeneID; 100135716; -.
DR KEGG; xtr:100135716; -.
DR CTD; 23567; -.
DR Xenbase; XB-GENE-967544; znf346.
DR eggNOG; ENOG502RVNK; Eukaryota.
DR InParanoid; B0JZ85; -.
DR OrthoDB; 1565630at2759; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000007230; Expressed in egg cell and 16 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003725; F:double-stranded RNA binding; ISS:UniProtKB.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SMART; SM00451; ZnF_U1; 4.
DR SUPFAM; SSF57667; SSF57667; 4.
PE 2: Evidence at transcript level;
KW Cytoplasm; Metal-binding; Nucleus; Reference proteome; Repeat; RNA-binding;
KW Zinc; Zinc-finger.
FT CHAIN 1..354
FT /note="Zinc finger protein 346"
FT /id="PRO_0000348935"
FT ZN_FING 34..64
FT /note="Matrin-type 1"
FT /evidence="ECO:0000255"
FT ZN_FING 95..125
FT /note="Matrin-type 2"
FT /evidence="ECO:0000255"
FT ZN_FING 165..195
FT /note="Matrin-type 3"
FT /evidence="ECO:0000255"
FT ZN_FING 232..262
FT /note="Matrin-type 4"
FT /evidence="ECO:0000255"
FT REGION 263..343
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..334
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 36
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 39
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 52
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 58
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 97
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 100
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 113
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
FT BINDING 119
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q8AVN9"
SQ SEQUENCE 354 AA; 37823 MW; 52781FC8C79DF223 CRC64;
MADEFGDGDT VELPVGKEAV DALIRENSHI FSDTQCKVCS AVLISESQKL AHYQSRKHAN
KVRRYMSIHQ GEEFVSAKKF KAAPAESSDG DDRSKCCPIC NMTFSSPVVA ESHYSGKTHI
KNLRLREQGG VTEGMLHQAK KLVVTRTPTI ATKIDNRMDQ SDPTKFCKLC HATFNNPLMA
EQHYAGKKHK KQETKTQLMT IYTSSGHTPA QAPIAINVNS PLPGSGSAGK GFSCDTCNIV
LNSIEQYQAH VSGAKHKNQL MSMTPLSKEG PPAAGGPSAL AGPPSTGGAL SSGGPSARGF
SASGGPTPKG PSSFGGLPPM GGLMPPPYPP PHSQPYVRED MMGPDGYTYF NKDF