CCA11_ORYSJ
ID CCA11_ORYSJ Reviewed; 508 AA.
AC Q7F830; A0A0P0V073; Q9SSZ6;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Cyclin-A1-1;
DE AltName: Full=G2/mitotic-specific cyclin-A1-1;
DE Short=CycA1;1;
GN Name=CYCA1-1; Synonyms=CYCA1;
GN OrderedLocusNames=Os01g0233500, LOC_Os01g13260; ORFNames=P0702F03.11;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, AND DEVELOPMENTAL
RP STAGE.
RC STRAIN=cv. Yamahoushi;
RX PubMed=10517318; DOI=10.1007/s004380051079;
RA Umeda M., Iwamoto N., Umeda-Hara C., Yamaguchi M., Hashimoto J.,
RA Uchimiya H.;
RT "Molecular characterization of mitotic cyclins in rice plants.";
RL Mol. Gen. Genet. 262:230-238(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, AND INDUCTION.
RX PubMed=10987556; DOI=10.1007/s004250000295;
RA Fabian T., Lorbiecke R., Umeda M., Sauter M.;
RT "The cell cycle genes cycA1;1 and cdc2Os-3 are coordinately regulated by
RT gibberellin in planta.";
RL Planta 211:376-383(2000).
RN [7]
RP NOMENCLATURE.
RX PubMed=16435118; DOI=10.1007/s00438-005-0093-5;
RA La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N.,
RA Ramachandran S.;
RT "Genome-wide analysis of cyclin family in rice (Oryza sativa L.).";
RL Mol. Genet. Genomics 275:374-386(2006).
CC -!- FUNCTION: Involved in the control of the cell cycle at the G2/M
CC (mitosis) transition. {ECO:0000269|PubMed:10517318,
CC ECO:0000269|PubMed:10987556}.
CC -!- TISSUE SPECIFICITY: Expressed in the dividing region of the root cap
CC and root apex. Expressed in the intercalary meristem of internodes and
CC in adventitious roots under submergence conditions.
CC {ECO:0000269|PubMed:10517318, ECO:0000269|PubMed:10987556}.
CC -!- DEVELOPMENTAL STAGE: Expressed in the G2/M phases and disappears at the
CC metaphase of mitosis. {ECO:0000269|PubMed:10517318,
CC ECO:0000269|PubMed:10987556}.
CC -!- INDUCTION: By gibberellin (GA3) and submergence.
CC {ECO:0000269|PubMed:10987556}.
CC -!- SIMILARITY: Belongs to the cyclin family. Cyclin AB subfamily.
CC {ECO:0000305}.
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DR EMBL; AB024986; BAA86628.1; -; mRNA.
DR EMBL; AP002481; BAA96590.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF04426.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS71197.1; -; Genomic_DNA.
DR RefSeq; XP_015630726.1; XM_015775240.1.
DR AlphaFoldDB; Q7F830; -.
DR SMR; Q7F830; -.
DR STRING; 4530.OS01T0233500-01; -.
DR PaxDb; Q7F830; -.
DR PRIDE; Q7F830; -.
DR EnsemblPlants; Os01t0233500-01; Os01t0233500-01; Os01g0233500.
DR GeneID; 4324288; -.
DR Gramene; Os01t0233500-01; Os01t0233500-01; Os01g0233500.
DR KEGG; osa:4324288; -.
DR eggNOG; KOG0654; Eukaryota.
DR HOGENOM; CLU_020695_13_2_1; -.
DR InParanoid; Q7F830; -.
DR OMA; MDETMSS; -.
DR OrthoDB; 993640at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR Genevisible; Q7F830; OS.
DR GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0044772; P:mitotic cell cycle phase transition; IBA:GO_Central.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IBA:GO_Central.
DR CDD; cd00043; CYCLIN; 2.
DR InterPro; IPR039361; Cyclin.
DR InterPro; IPR013763; Cyclin-like.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR004367; Cyclin_C-dom.
DR InterPro; IPR006671; Cyclin_N.
DR PANTHER; PTHR10177; PTHR10177; 1.
DR Pfam; PF02984; Cyclin_C; 1.
DR Pfam; PF00134; Cyclin_N; 1.
DR PIRSF; PIRSF001771; Cyclin_A_B_D_E; 1.
DR SMART; SM00385; CYCLIN; 2.
DR SMART; SM01332; Cyclin_C; 1.
DR SUPFAM; SSF47954; SSF47954; 2.
DR PROSITE; PS00292; CYCLINS; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Cyclin; Mitosis; Reference proteome.
FT CHAIN 1..508
FT /note="Cyclin-A1-1"
FT /id="PRO_0000286989"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 82..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 508 AA; 55035 MW; E750D07E5574B210 CRC64;
MSSNLAASRR SSSSSSVAAA AAAKRPAVGE GGGGGGGKAA AGAAAAKKRV ALSNISNVAA
GGGAPGKAGN AKLNLAASAA PVKKGSLASG RNVGTNRASA VKSASAKPAP AISRHESATQ
KESVLPPKVP SIVPTAALAP VTVPCSSFVS PMHSGDSVSV DETMSTCDSM KSPEFEYIDN
GDSSSVLGSL QRRANENLRI SEDRDVEETK WKKDAPSPME IDQICDVDNN YEDPQLCATL
ASDIYMHLRE AETRKRPSTD FMETIQKDVN PSMRAILIDW LVEVAEEYRL VPDTLYLTVN
YIDRYLSGNE INRQRLQLLG VACMLIAAKY EEICAPQVEE FCYITDNTYF RDEVLEMEAS
VLNYLKFEVT APTAKCFLRR FVRVAQVSDE DPALHLEFLA NYVAELSLLE YNLLSYPPSL
VAASAIFLAK FILQPTKHPW NSTLAHYTQY KSSELSDCVK ALHRLFSVGP GSNLPAIREK
YTQHKYKFVA KKPCPPSIPT EFFRDATC
