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CCA13_ORYSJ
ID   CCA13_ORYSJ             Reviewed;         491 AA.
AC   Q0INT0; Q0INT1;
DT   15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT   15-MAY-2007, sequence version 2.
DT   03-AUG-2022, entry version 98.
DE   RecName: Full=Cyclin-A1-3;
DE   AltName: Full=G2/mitotic-specific cyclin-A1-3;
DE            Short=CycA1;3;
GN   Name=CYCA1-3; OrderedLocusNames=LOC_Os12g20324;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG   The rice chromosomes 11 and 12 sequencing consortia;
RT   "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT   genes and recent gene duplications.";
RL   BMC Biol. 3:20-20(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   STRAIN=cv. Nipponbare;
RG   The rice full-length cDNA consortium;
RT   "Oryza sativa full length cDNA.";
RL   Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=16435118; DOI=10.1007/s00438-005-0093-5;
RA   La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N.,
RA   Ramachandran S.;
RT   "Genome-wide analysis of cyclin family in rice (Oryza sativa L.).";
RL   Mol. Genet. Genomics 275:374-386(2006).
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q0INT0-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q0INT0-2; Sequence=VSP_025279;
CC   -!- SIMILARITY: Belongs to the cyclin family. Cyclin AB subfamily.
CC       {ECO:0000305}.
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DR   EMBL; BX000557; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AP014968; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AK288001; -; NOT_ANNOTATED_CDS; mRNA.
DR   AlphaFoldDB; Q0INT0; -.
DR   SMR; Q0INT0; -.
DR   STRING; 4530.OS12T0298950-00; -.
DR   PaxDb; Q0INT0; -.
DR   PRIDE; Q0INT0; -.
DR   eggNOG; KOG0654; Eukaryota.
DR   HOGENOM; CLU_020695_13_2_1; -.
DR   InParanoid; Q0INT0; -.
DR   Proteomes; UP000000763; Chromosome 12.
DR   Proteomes; UP000059680; Chromosome 12.
DR   Genevisible; Q0INT0; OS.
DR   GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IBA:GO_Central.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   GO; GO:0044772; P:mitotic cell cycle phase transition; IBA:GO_Central.
DR   GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IBA:GO_Central.
DR   CDD; cd00043; CYCLIN; 2.
DR   InterPro; IPR039361; Cyclin.
DR   InterPro; IPR013763; Cyclin-like.
DR   InterPro; IPR036915; Cyclin-like_sf.
DR   InterPro; IPR004367; Cyclin_C-dom.
DR   InterPro; IPR006671; Cyclin_N.
DR   PANTHER; PTHR10177; PTHR10177; 1.
DR   Pfam; PF02984; Cyclin_C; 1.
DR   Pfam; PF00134; Cyclin_N; 1.
DR   PIRSF; PIRSF001771; Cyclin_A_B_D_E; 1.
DR   SMART; SM00385; CYCLIN; 2.
DR   SMART; SM01332; Cyclin_C; 1.
DR   SUPFAM; SSF47954; SSF47954; 2.
DR   PROSITE; PS00292; CYCLINS; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Cell cycle; Cell division; Cyclin;
KW   Reference proteome.
FT   CHAIN           1..491
FT                   /note="Cyclin-A1-3"
FT                   /id="PRO_0000286991"
FT   REGION          1..32
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          69..106
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..17
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        72..100
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   VAR_SEQ         1..146
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|Ref.4"
FT                   /id="VSP_025279"
SQ   SEQUENCE   491 AA;  54048 MW;  ABB1FEFE879F18EE CRC64;
     MSSSLASRRS SSSSAAKRPA AGEGGGKAAA GAAAAKKRVA LGNITNVAAA ANNAKFNSAT
     WAAPVKKGSL ASGRNVGTNR VSAVKSASTK PASAISRHES APQKESVLPP KVLRIVPTAA
     PAPVTVPCSS FVSPMHSGDS VSVDETMSTC DSMKSPDFEY IDNGDSSSVL GSLQRRANEN
     LRISEDRDVE ETKWKKDAPS PMEIDQICDV DNNYEDPQLC ATLASDIYMH LREAETRKHP
     STDFMETLQK DVNPSMRAIL IDWLVEVAEE YRLVPDTLYL TVNYIDRYLS GNEINRQRLQ
     LLGVACMLIA AKYKEICAPQ VEEFCYITDN TYFRDEVLEM EASVLNYLKF EMTAPTAKCF
     LRRFVRVAQV SDEDPALHLE FLANYVAELS LLEYNLLSYP PSLVAASAIF LAKFILQPAK
     HPWNSTLAHY TQYKSSELSD CVKALHRLFC VGPGSNLPAI REKYTQHKYK FVAKKPCPPS
     IPTEFFRDST C
 
 
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