CCA14_ORYSJ
ID CCA14_ORYSJ Reviewed; 356 AA.
AC Q0DJR9; Q6F346;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 2.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=Cyclin-A1-4;
DE AltName: Full=G2/mitotic-specific cyclin-A1-4;
DE Short=CycA1;4;
GN Name=CYCA1-4; OrderedLocusNames=Os05g0237100, LOC_Os05g14730;
GN ORFNames=OJ1384_A02.11;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 153-356.
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16435118; DOI=10.1007/s00438-005-0093-5;
RA La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N.,
RA Ramachandran S.;
RT "Genome-wide analysis of cyclin family in rice (Oryza sativa L.).";
RL Mol. Genet. Genomics 275:374-386(2006).
CC -!- SIMILARITY: Belongs to the cyclin family. Cyclin AB subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAT73638.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF16904.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC118286; AAT73638.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008211; BAF16904.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014961; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AK103430; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015637619.1; XM_015782133.1.
DR AlphaFoldDB; Q0DJR9; -.
DR SMR; Q0DJR9; -.
DR STRING; 4530.OS05T0237100-01; -.
DR PaxDb; Q0DJR9; -.
DR PRIDE; Q0DJR9; -.
DR GeneID; 4338177; -.
DR KEGG; osa:4338177; -.
DR eggNOG; KOG0654; Eukaryota.
DR InParanoid; Q0DJR9; -.
DR OrthoDB; 993640at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0044772; P:mitotic cell cycle phase transition; IBA:GO_Central.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IBA:GO_Central.
DR CDD; cd00043; CYCLIN; 2.
DR InterPro; IPR039361; Cyclin.
DR InterPro; IPR013763; Cyclin-like.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR004367; Cyclin_C-dom.
DR InterPro; IPR006671; Cyclin_N.
DR PANTHER; PTHR10177; PTHR10177; 1.
DR Pfam; PF02984; Cyclin_C; 1.
DR Pfam; PF00134; Cyclin_N; 1.
DR SMART; SM00385; CYCLIN; 2.
DR SMART; SM01332; Cyclin_C; 1.
DR SUPFAM; SSF47954; SSF47954; 2.
DR PROSITE; PS00292; CYCLINS; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Cyclin; Reference proteome.
FT CHAIN 1..356
FT /note="Cyclin-A1-4"
FT /id="PRO_0000286992"
SQ SEQUENCE 356 AA; 40580 MW; 8F7616B43904B272 CRC64;
MSKEDAMSTG DSTESLDIDC LDDGDSEVVS SLQHLADDKL HISDNRDVAG VASKWTKHGC
NSVEIDYIVD IDNNHEDPQL CATLAFDIYK HLRVAETKKR PSTDFVETIQ KNIDTSMRAV
LIDWLVEVTE EYRLVPETLY LTVNYIDRYL SSKVINRRKM QLLGVACLLI ASKYEEICPP
QVEELCYISD NTYTKDEVLK MEASVLKYLK FEMTAPTTKC FLRRFLRAAQ VCHEAPVLHL
EFLANYIAEL SLLEYSLICY VPSLIAASSI FLAKFILKPT ENPWNSTLSF YTQYKPSDLC
NCAKGLHRLF LVGPGGNLRA VREKYSQHKY KFVAKKYSPP SIPAEFFEDP SSYKPD
