ZRAB2_CHICK
ID ZRAB2_CHICK Reviewed; 334 AA.
AC Q5ZLX5;
DT 01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Zinc finger Ran-binding domain-containing protein 2;
GN Name=ZRANB2 {ECO:0000250|UniProtKB:O95218}; ORFNames=RCJMB04_4i6;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1] {ECO:0000312|EMBL:CAG31268.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB {ECO:0000312|EMBL:CAG31268.1};
RC TISSUE=Bursa of Fabricius {ECO:0000312|EMBL:CAG31268.1};
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: May regulate alternative splicing by interfering with
CC constitutive 5'-splice site selection. {ECO:0000250|UniProtKB:O95218}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O95218}.
CC -!- DOMAIN: The RanBP2-type zinc fingers mediate binding to RNA.
CC {ECO:0000250|UniProtKB:O95218}.
CC -!- SIMILARITY: Belongs to the ZRANB2 family. {ECO:0000255}.
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DR EMBL; AJ719609; CAG31268.1; -; mRNA.
DR RefSeq; NP_001026468.1; NM_001031297.1.
DR RefSeq; XP_015146542.1; XM_015291056.1.
DR AlphaFoldDB; Q5ZLX5; -.
DR SMR; Q5ZLX5; -.
DR STRING; 9031.ENSGALP00000018494; -.
DR PaxDb; Q5ZLX5; -.
DR Ensembl; ENSGALT00000018517; ENSGALP00000018494; ENSGALG00000011340.
DR GeneID; 424717; -.
DR KEGG; gga:424717; -.
DR CTD; 9406; -.
DR VEuPathDB; HostDB:geneid_424717; -.
DR eggNOG; KOG1995; Eukaryota.
DR GeneTree; ENSGT00730000111078; -.
DR HOGENOM; CLU_061048_0_0_1; -.
DR InParanoid; Q5ZLX5; -.
DR OMA; DLWGDNE; -.
DR OrthoDB; 1399319at2759; -.
DR PhylomeDB; Q5ZLX5; -.
DR TreeFam; TF105996; -.
DR PRO; PR:Q5ZLX5; -.
DR Proteomes; UP000000539; Chromosome 8.
DR Bgee; ENSGALG00000011340; Expressed in ovary and 12 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0001530; F:lipopolysaccharide binding; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR InterPro; IPR017337; ZRANB2.
DR Pfam; PF00641; zf-RanBP; 2.
DR PIRSF; PIRSF037956; UCP037956_ZnF_Ran; 1.
DR SMART; SM00547; ZnF_RBZ; 2.
DR SUPFAM; SSF90209; SSF90209; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 2.
DR PROSITE; PS50199; ZF_RANBP2_2; 2.
PE 2: Evidence at transcript level;
KW Metal-binding; Nucleus; Phosphoprotein; Reference proteome; Repeat;
KW RNA-binding; Zinc; Zinc-finger.
FT CHAIN 1..334
FT /note="Zinc finger Ran-binding domain-containing protein 2"
FT /id="PRO_0000285986"
FT ZN_FING 9..40
FT /note="RanBP2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00322"
FT ZN_FING 65..94
FT /note="RanBP2-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00322"
FT REGION 117..334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 117..132
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 151..181
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 182..199
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..283
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 296..313
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 334 AA; 37863 MW; 25FBFBEB8AD7F00F CRC64;
MSTKNFRVSD GDWICPDKKC GNVNFARRTS CNRCGREKTT EAKMMKAGGT EIGKTLAEKS
RGLFSANDWQ CKTCGNVNWA RRSECNMCNT PKYAKLEERT GYGGGFNERE NVEYIEREES
DGEYDEFGRK KKKYRGKPVG PASILKEVED KESEGEDEED EDGDLSKYKL DEDEDEDDAD
LSKYNLDASE EEDTNKKKKS NRRSRSKSRS SHSRSSSRSS SHSSSRSRSR SHSRSSSSSR
SRSRSSSREH SRSRGSKSRS SSRSYRGSST PRKRSYSSSR SSSSPERSKK RSRSRSSSSG
DRKKRRSRSR SPERRRRSSS GSSHSGSRTS SKKK