ID   CCC11_ORYSJ             Reviewed;         257 AA.
AC   P93411; B7EKR4;
DT   15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1997, sequence version 1.
DT   03-AUG-2022, entry version 121.
DE   RecName: Full=Cyclin-C1-1;
DE            Short=CycC1;1;
GN   OrderedLocusNames=Os09g0504400, LOC_Os09g32680;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Nipponbare; TISSUE=Callus;
RA   Hashimoto J., Tanaka H., Yamamoto K., Sasaki T.;
RT   "A cDNA clone encoding a C-type cyclin from rice.";
RL   (er) Plant Gene Register PGR96-084(1996).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=16435118; DOI=10.1007/s00438-005-0093-5;
RA   La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N.,
RA   Ramachandran S.;
RT   "Genome-wide analysis of cyclin family in rice (Oryza sativa L.).";
RL   Mol. Genet. Genomics 275:374-386(2006).
CC   -!- SIMILARITY: Belongs to the cyclin family. Cyclin C subfamily.
CC       {ECO:0000305}.
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DR   EMBL; D86925; BAA13181.1; -; mRNA.
DR   EMBL; AC108763; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AP008215; BAH94657.1; -; Genomic_DNA.
DR   EMBL; AP014965; BAT08842.1; -; Genomic_DNA.
DR   EMBL; AK072415; BAG92961.1; -; mRNA.
DR   PIR; T03724; T03724.
DR   RefSeq; XP_015611762.1; XM_015756276.1.
DR   AlphaFoldDB; P93411; -.
DR   SMR; P93411; -.
DR   STRING; 4530.OS09T0504400-01; -.
DR   PaxDb; P93411; -.
DR   PRIDE; P93411; -.
DR   EnsemblPlants; Os09t0504400-01; Os09t0504400-01; Os09g0504400.
DR   GeneID; 9272663; -.
DR   Gramene; Os09t0504400-01; Os09t0504400-01; Os09g0504400.
DR   KEGG; osa:9272663; -.
DR   eggNOG; KOG0794; Eukaryota.
DR   HOGENOM; CLU_034754_0_0_1; -.
DR   InParanoid; P93411; -.
DR   OMA; SHHQQWL; -.
DR   OrthoDB; 1079428at2759; -.
DR   Proteomes; UP000000763; Chromosome 9.
DR   Proteomes; UP000059680; Chromosome 9.
DR   Genevisible; P93411; OS.
DR   GO; GO:0016592; C:mediator complex; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   CDD; cd00043; CYCLIN; 2.
DR   InterPro; IPR013763; Cyclin-like.
DR   InterPro; IPR036915; Cyclin-like_sf.
DR   InterPro; IPR043198; Cyclin/Ssn8.
DR   InterPro; IPR006671; Cyclin_N.
DR   PANTHER; PTHR10026; PTHR10026; 1.
DR   Pfam; PF00134; Cyclin_N; 1.
DR   SMART; SM00385; CYCLIN; 2.
DR   SUPFAM; SSF47954; SSF47954; 2.
PE   2: Evidence at transcript level;
KW   Cell cycle; Cell division; Cyclin; Reference proteome.
FT   CHAIN           1..257
FT                   /note="Cyclin-C1-1"
FT                   /id="PRO_0000080425"
SQ   SEQUENCE   257 AA;  30193 MW;  E32F6FF8B4BA3425 CRC64;
     MAANFWTSSH CKQLLDQEDV DKVPQADSDR GITLEEFRLV KIHMSFHIWR LAQQVKVRQR
     VIATAVTYFR RVYTRKSMTE YDPRLVAPTC LYLASKVEES TVQARLLVFY IKKMCASDEK
     YRFEIKDILE MEMKLLEALD YYLVVYHPYR PLLQLLQDAG ITDLTQFAWG IVNDTYKMDL
     ILIHPPYMIA LACIYIASVL KDKDITLWFE ELRVDMNIVK NISMEILDFY DTYKIDPQRG
     LPEDKIAPVM NKLPSKA