CCD52_ORYSJ
ID CCD52_ORYSJ Reviewed; 365 AA.
AC Q2QMW1; A0A0P0YBT3;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Cyclin-D5-2;
DE AltName: Full=G1/S-specific cyclin-D5-2;
DE Short=CycD5;2;
GN Name=CYCD5-2; OrderedLocusNames=Os12g0588800, LOC_Os12g39830;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16435118; DOI=10.1007/s00438-005-0093-5;
RA La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N.,
RA Ramachandran S.;
RT "Genome-wide analysis of cyclin family in rice (Oryza sativa L.).";
RL Mol. Genet. Genomics 275:374-386(2006).
CC -!- SIMILARITY: Belongs to the cyclin family. Cyclin D subfamily.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; DP000011; ABA99754.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF30181.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17864.1; -; Genomic_DNA.
DR EMBL; AK101602; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015619001.1; XM_015763515.1.
DR AlphaFoldDB; Q2QMW1; -.
DR SMR; Q2QMW1; -.
DR STRING; 4530.OS12T0588800-01; -.
DR PaxDb; Q2QMW1; -.
DR PRIDE; Q2QMW1; -.
DR EnsemblPlants; Os12t0588800-01; Os12t0588800-01; Os12g0588800.
DR GeneID; 4352668; -.
DR Gramene; Os12t0588800-01; Os12t0588800-01; Os12g0588800.
DR KEGG; osa:4352668; -.
DR eggNOG; KOG0656; Eukaryota.
DR HOGENOM; CLU_048040_4_0_1; -.
DR InParanoid; Q2QMW1; -.
DR OMA; VFLFYNA; -.
DR OrthoDB; 1234739at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QMW1; OS.
DR GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0044772; P:mitotic cell cycle phase transition; IBA:GO_Central.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IBA:GO_Central.
DR CDD; cd00043; CYCLIN; 1.
DR InterPro; IPR039361; Cyclin.
DR InterPro; IPR013763; Cyclin-like.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR004367; Cyclin_C-dom.
DR InterPro; IPR006671; Cyclin_N.
DR PANTHER; PTHR10177; PTHR10177; 1.
DR Pfam; PF02984; Cyclin_C; 1.
DR Pfam; PF00134; Cyclin_N; 1.
DR SMART; SM00385; CYCLIN; 1.
DR SUPFAM; SSF47954; SSF47954; 1.
DR PROSITE; PS00292; CYCLINS; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Cyclin; Reference proteome.
FT CHAIN 1..365
FT /note="Cyclin-D5-2"
FT /id="PRO_0000287035"
FT CONFLICT 53
FT /note="E -> K (in Ref. 5; AK101602)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 365 AA; 39406 MW; A196C3DBC7906092 CRC64;
MSMEEAEECS AACGFSLTCQ EDGADLGDGV VDDDDDGDVF LFYNAVAAAD DEEEEEEYVE
QMVSKEASFC CSSSSSLFDA AAGDGYGDGD GDGDWFRQAR LAAVKWILET RGYFGFGHRT
AYLAIAYFDR FCLRRRVDRE AMPWAARLLS IACVSVAAKM EEYQSPALSE FDAGGGRVFC
SDSIRRMELL VLSTLGWRMG AVTPFDFLPC FSSRLHRHHH GGAGAAGHGA AAAARVALNA
VGFIFATAEA GSVLDYRPST VAAAAILAAS YGAPLTKEAL ESKMSNLSPS CLIDKENVHA
CYSMMVGDMN NNRRSSKRPL QCSDSNEITT TSTYDSVLVD DVTDTAAFAA TAMNKRLRPE
PPRIR
