CCJ18_ARATH
ID CCJ18_ARATH Reviewed; 234 AA.
AC Q9C5X2;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 2.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Cyclin-J18;
GN Name=CYCJ18; OrderedLocusNames=At2g01905; ORFNames=T23K3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RX PubMed=11389963; DOI=10.1016/s0167-4889(01)00106-9;
RA Abrahams S., Cavet G., Oakenfull E.A., Carmichael J.P., Shah Z.H., Soni R.,
RA Murray J.A.H.;
RT "A novel and highly divergent Arabidopsis cyclin isolated by
RT complementation in budding yeast.";
RL Biochim. Biophys. Acta 1539:1-6(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- DEVELOPMENTAL STAGE: Expressed in 7 day- and 14 day old seedlings.
CC {ECO:0000269|PubMed:11389963}.
CC -!- SIMILARITY: Belongs to the cyclin family. {ECO:0000305}.
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DR EMBL; AF331758; AAK01135.1; -; mRNA.
DR EMBL; AC007069; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002685; AEC05515.1; -; Genomic_DNA.
DR RefSeq; NP_001030944.1; NM_001035867.3.
DR AlphaFoldDB; Q9C5X2; -.
DR SMR; Q9C5X2; -.
DR STRING; 3702.AT2G01905.1; -.
DR PaxDb; Q9C5X2; -.
DR PRIDE; Q9C5X2; -.
DR EnsemblPlants; AT2G01905.1; AT2G01905.1; AT2G01905.
DR GeneID; 3768365; -.
DR Gramene; AT2G01905.1; AT2G01905.1; AT2G01905.
DR KEGG; ath:AT2G01905; -.
DR Araport; AT2G01905; -.
DR TAIR; locus:1009023203; AT2G01905.
DR eggNOG; ENOG502QPM6; Eukaryota.
DR HOGENOM; CLU_091501_0_0_1; -.
DR InParanoid; Q9C5X2; -.
DR OMA; EFPVLAW; -.
DR OrthoDB; 1362949at2759; -.
DR PhylomeDB; Q9C5X2; -.
DR PRO; PR:Q9C5X2; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9C5X2; baseline and differential.
DR GO; GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016538; F:cyclin-dependent protein serine/threonine kinase regulator activity; IBA:GO_Central.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0044772; P:mitotic cell cycle phase transition; IBA:GO_Central.
DR GO; GO:0051726; P:regulation of cell cycle; TAS:TAIR.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IBA:GO_Central.
DR InterPro; IPR039361; Cyclin.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR006671; Cyclin_N.
DR PANTHER; PTHR10177; PTHR10177; 1.
DR Pfam; PF00134; Cyclin_N; 1.
DR SUPFAM; SSF47954; SSF47954; 1.
PE 2: Evidence at transcript level;
KW Cell cycle; Cell division; Cyclin; Reference proteome.
FT CHAIN 1..234
FT /note="Cyclin-J18"
FT /id="PRO_0000287387"
FT CONFLICT 20
FT /note="T -> A (in Ref. 1; AAK01135)"
FT /evidence="ECO:0000305"
FT CONFLICT 134
FT /note="R -> L (in Ref. 1; AAK01135)"
FT /evidence="ECO:0000305"
FT CONFLICT 139..140
FT /note="LI -> FT (in Ref. 1; AAK01135)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 234 AA; 27300 MW; 31C4DF4E534B1160 CRC64;
MSTEIGHLRR RLVEFLIQST TLLELPPIVK YSALSLFFDR FRPNLVRFLQ KKKAEHWLLQ
PLNESNLQLF VLISIWISCK MHCTRGLSVH SLKSFGDKVI TEQLFMVRDF LDAELVFLKV
LKFEIGTLNI AYTRLEDLLI QFKEVAKVGE QLNFEACMDM MDLLYEKEDT SLLYQSSKSL
AASILVSSYI ITVPKQQYEF PILPWVKMVT NKEEREVVEL VEYILAHVLY SNSP