CCL5_HUMLU
ID CCL5_HUMLU Reviewed; 551 AA.
AC M4IQR7;
DT 02-JUN-2021, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2013, sequence version 1.
DT 03-AUG-2022, entry version 21.
DE RecName: Full=Probable CoA ligase CCL5 {ECO:0000305|PubMed:23300257};
DE Short=HlCCL5 {ECO:0000303|PubMed:23300257};
DE EC=6.2.1.- {ECO:0000305|PubMed:23300257};
GN Name=CCL5 {ECO:0000303|PubMed:23300257};
OS Humulus lupulus (European hop).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Cannabaceae; Humulus.
OX NCBI_TaxID=3486;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, GENE
RP FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nugget;
RX PubMed=23300257; DOI=10.1093/mp/sst004;
RA Xu H., Zhang F., Liu B., Huhman D.V., Sumner L.W., Dixon R.A., Wang G.;
RT "Characterization of the formation of branched short-chain fatty acid:CoAs
RT for bitter acid biosynthesis in hop glandular trichomes.";
RL Mol. Plant 6:1301-1317(2013).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000250|UniProtKB:M4IRL4}.
CC -!- TISSUE SPECIFICITY: Mostly expressed at low levels in glandular
CC trichomes (lupulin glands) after flowering, and, to a lower extent, in
CC stems, leaves, cones and flowers. {ECO:0000269|PubMed:23300257}.
CC -!- DEVELOPMENTAL STAGE: Accumulates progressively in glandular trichomes
CC (lupulin glands) after flowering. {ECO:0000269|PubMed:23300257}.
CC -!- DOMAIN: Both substrate-binding domains (SBD1 and SBD2) are involved in
CC the substrate recognition, and are sufficient to confer the substrate
CC specificity. {ECO:0000250|UniProtKB:Q42524}.
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000305}.
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DR EMBL; JQ740207; AGA17922.1; -; mRNA.
DR AlphaFoldDB; M4IQR7; -.
DR SMR; M4IQR7; -.
DR GO; GO:0005829; C:cytosol; ISS:UniProtKB.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016405; F:CoA-ligase activity; ISS:UniProtKB.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; -; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Cytoplasm; Ligase; Nucleotide-binding.
FT CHAIN 1..551
FT /note="Probable CoA ligase CCL5"
FT /id="PRO_0000452950"
FT REGION 274..345
FT /note="SBD1"
FT /evidence="ECO:0000250|UniProtKB:Q42524"
FT REGION 346..410
FT /note="SBD2"
FT /evidence="ECO:0000250|UniProtKB:Q42524"
FT BINDING 204..212
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 345..350
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 431
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 443..446
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 537
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
SQ SEQUENCE 551 AA; 60044 MW; 82B8EC368CB8DB70 CRC64;
MENSSKAIVD ERSGYCKSNS IFYSKREPVQ LPQNHSVDVT TFISSRAHHG KIAFIDAATG
RHLTFPQLWR AVDSVATCLS AMGIRKGDVI LLLSPNSIYF PVVCLAVMSL GAIITTTNPL
NTPREIAKQI TDSKPVLAFT IPQLVSKIAG SNLPIVIIDD EVKSSLEKTL NIVSSLGEMM
RKEPSPNRIG YRVNQEDTAT LLYSSGTTGA SKGVVSSHKN LIAMVQTILS RFGTEDGEHT
FICTVPMFHI YGLAAFAMGL LSSGSTIVIL SKFEIHEMLS AIEKYRATYL PLVPPILMAL
LKNANHIRAK YDLSSLQSVL SGGAPLSKEV IEGFVENYPT VSILQGYGLT ESTGIGASTD
CLQESRRYGT AGMLSPSMEA KIVNPETGEA LSVNRTGELW LRGPTIMKGY FSNEEATSST
IDSEGWLRTG DLCYIDEDGF IFVVDRLKEL IKYKGYQVAP AELEALLLSH PEISDAAVIP
YPDKEAGQFP MAYVVRKGGS NLSESTVMDF IAKLVAPYKR IRKVAFVASI PKNPSGKILR
KDLIKLATSK L