CCL8_HUMLU
ID CCL8_HUMLU Reviewed; 607 AA.
AC M4IS90;
DT 02-JUN-2021, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2013, sequence version 1.
DT 03-AUG-2022, entry version 18.
DE RecName: Full=Probable CoA ligase CCL8 {ECO:0000305|PubMed:23300257};
DE Short=HlCCL8 {ECO:0000303|PubMed:23300257};
DE EC=6.2.1.- {ECO:0000305|PubMed:23300257};
GN Name=CCL8 {ECO:0000303|PubMed:23300257};
OS Humulus lupulus (European hop).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Cannabaceae; Humulus.
OX NCBI_TaxID=3486;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], SUBCELLULAR LOCATION, TISSUE SPECIFICITY, GENE
RP FAMILY, AND NOMENCLATURE.
RC STRAIN=cv. Nugget;
RX PubMed=23300257; DOI=10.1093/mp/sst004;
RA Xu H., Zhang F., Liu B., Huhman D.V., Sumner L.W., Dixon R.A., Wang G.;
RT "Characterization of the formation of branched short-chain fatty acid:CoAs
RT for bitter acid biosynthesis in hop glandular trichomes.";
RL Mol. Plant 6:1301-1317(2013).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol {ECO:0000269|PubMed:23300257}.
CC -!- TISSUE SPECIFICITY: Mostly expressed at low levels in glandular
CC trichomes (lupulin glands) after flowering, and, to a lower extent, in
CC stems, leaves, flowers and cones. {ECO:0000269|PubMed:23300257}.
CC -!- DOMAIN: Both substrate-binding domains (SBD1 and SBD2) are involved in
CC the substrate recognition, and are sufficient to confer the substrate
CC specificity. {ECO:0000250|UniProtKB:Q42524}.
CC -!- SIMILARITY: Belongs to the ATP-dependent AMP-binding enzyme family.
CC {ECO:0000305}.
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DR EMBL; JQ740210; AGA17925.1; -; mRNA.
DR AlphaFoldDB; M4IS90; -.
DR SMR; M4IS90; -.
DR GO; GO:0005829; C:cytosol; IDA:UniProtKB.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016405; F:CoA-ligase activity; ISS:UniProtKB.
DR Gene3D; 3.30.300.30; -; 1.
DR Gene3D; 3.40.50.12780; -; 1.
DR InterPro; IPR025110; AMP-bd_C.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR Pfam; PF00501; AMP-binding; 1.
DR Pfam; PF13193; AMP-binding_C; 1.
DR PROSITE; PS00455; AMP_BINDING; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Cytoplasm; Ligase; Nucleotide-binding.
FT CHAIN 1..607
FT /note="Probable CoA ligase CCL8"
FT /id="PRO_0000452953"
FT REGION 305..391
FT /note="SBD1"
FT /evidence="ECO:0000250|UniProtKB:Q42524"
FT REGION 392..453
FT /note="SBD2"
FT /evidence="ECO:0000250|UniProtKB:Q42524"
FT BINDING 236..244
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 391..396
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 474
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 486..489
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
FT BINDING 591
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250|UniProtKB:Q81G39"
SQ SEQUENCE 607 AA; 66146 MW; C455F764DEDA68DD CRC64;
MHLNLKSLCS LTLISQAKTS NPFLSFSNCR PFSSLHSGSA NLILMELLKE VAKEGSSASV
GVAIRADQKS YSYKQLISSA QRICSLLCST DLKASHKAGK QVTPALINGL SGHGHLGGAR
VGIVAKPSAE FVTGVLGTWL SGGVAVPLAL SYPEAELLHV MTDSDISMIL STEDHQELMQ
KIAAKTAAQF SLIPPVPSSC SQEGAVDHLQ TGDINTDSIL HNTEISNENP ALIVYTSGTT
GKPKGVVHTH KSINAQVQTL AKAWEYTPAD QFLHCLPLHH VHGLFNALFA PLYARSTVEF
MPKFSVRGIW QRWRESYPTC ETKVDDCITV FTGVPTMYTR LIQGYEAMDP ELKEASASAA
KQLRLMMCGS SALPIPVMQQ WQTITGHRLL ERYGMTEFVM AISNPLKGER KAGTVGKPFP
GVEVRIVAED ENGSDTTGVG ELCVRSPSLF KEYWRLPEVT KSSFTDDGFF KTGDAGKVDE
DGYYVILGRT SADIMKVGGY KLSALEIESV LLEHPTVEEC CVLGLPDKDY GEAVSAIIVP
AAEAKKKGEE ESKPAISLEE LFSWAQHKLA PYKLPTRLFL WDSLPRNAMG KVNKKELKKK
LTVEQGV