CCU11_ARATH
ID CCU11_ARATH Reviewed; 210 AA.
AC Q9LJ45;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Cyclin-U1-1;
DE Short=CycU1;1;
DE AltName: Full=Cyclin-P2.1;
DE Short=CycP2;1;
GN Name=CYCU1-1; OrderedLocusNames=At3g21870; ORFNames=MEK6.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP TISSUE SPECIFICITY, AND INTERACTION WITH CDKA-1.
RX PubMed=15197472; DOI=10.1007/s00018-004-4057-4;
RA Torres Acosta J.A., de Almeida Engler J., Raes J., Magyar Z., de Groodt R.,
RA Inze D., de Veylder L.;
RT "Molecular characterization of Arabidopsis PHO80-like proteins, a novel
RT class of CDKA;1-interacting cyclins.";
RL Cell. Mol. Life Sci. 61:1485-1497(2004).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15208425; DOI=10.1104/pp.104.040436;
RA Wang G., Kong H., Sun Y., Zhang X., Zhang W., Altman N., dePamphilis C.W.,
RA Ma H.;
RT "Genome-wide analysis of the cyclin family in Arabidopsis and comparative
RT phylogenetic analysis of plant cyclin-like proteins.";
RL Plant Physiol. 135:1084-1099(2004).
CC -!- SUBUNIT: Interacts with CDKA-1. {ECO:0000269|PubMed:15197472}.
CC -!- INTERACTION:
CC Q9LJ45; P24100: CDKA-1; NbExp=2; IntAct=EBI-1773749, EBI-371713;
CC -!- TISSUE SPECIFICITY: Expressed in roots and flowers. Expressed in the
CC shoot apex, leaf primordia and young leaves.
CC {ECO:0000269|PubMed:15197472}.
CC -!- SIMILARITY: Belongs to the cyclin family. Cyclin U/P subfamily.
CC {ECO:0000305}.
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DR EMBL; AP000739; BAB02187.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76561.1; -; Genomic_DNA.
DR EMBL; BT014779; AAT41762.1; -; mRNA.
DR EMBL; BT015746; AAU84683.1; -; mRNA.
DR RefSeq; NP_188825.1; NM_113083.5.
DR AlphaFoldDB; Q9LJ45; -.
DR SMR; Q9LJ45; -.
DR BioGRID; 7074; 3.
DR IntAct; Q9LJ45; 1.
DR STRING; 3702.AT3G21870.1; -.
DR PaxDb; Q9LJ45; -.
DR PRIDE; Q9LJ45; -.
DR ProteomicsDB; 223875; -.
DR EnsemblPlants; AT3G21870.1; AT3G21870.1; AT3G21870.
DR GeneID; 821742; -.
DR Gramene; AT3G21870.1; AT3G21870.1; AT3G21870.
DR KEGG; ath:AT3G21870; -.
DR Araport; AT3G21870; -.
DR TAIR; locus:2088743; AT3G21870.
DR eggNOG; KOG1674; Eukaryota.
DR HOGENOM; CLU_057371_0_1_1; -.
DR InParanoid; Q9LJ45; -.
DR OMA; TDCSPSC; -.
DR OrthoDB; 1153955at2759; -.
DR PhylomeDB; Q9LJ45; -.
DR PRO; PR:Q9LJ45; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LJ45; baseline and differential.
DR Genevisible; Q9LJ45; AT.
DR GO; GO:0019901; F:protein kinase binding; IEA:InterPro.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IEA:InterPro.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR012389; Cyclin_P/U.
DR InterPro; IPR013922; Cyclin_PHO80-like.
DR PANTHER; PTHR15615; PTHR15615; 1.
DR Pfam; PF08613; Cyclin; 1.
DR PIRSF; PIRSF027110; PREG; 1.
DR SUPFAM; SSF47954; SSF47954; 1.
PE 1: Evidence at protein level;
KW Cell cycle; Cell division; Cyclin; Reference proteome.
FT CHAIN 1..210
FT /note="Cyclin-U1-1"
FT /id="PRO_0000287068"
SQ SEQUENCE 210 AA; 23446 MW; 5BE31F82D1A8E1AF CRC64;
MLTAAGDDEL DPVVGPESAT EAATPRVLTI ISHVMEKLVA RNEWLAKQTK GFGKSLEAFH
GVRAPSISIA KYLERIYKYT KCSPACFVVG YVYIDRLAHK HPGSLVVSLN VHRLLVTCVM
IAAKILDDVH YNNEFYARVG GVSNADLNKM ELELLFLLDF RVTVSFRVFE SYCFHLEKEM
QLNDAVSSLK DIQPMQESLS PASTLSSLYV