CCU31_ARATH
ID CCU31_ARATH Reviewed; 221 AA.
AC Q8LB60; Q9LYB0;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 15-MAY-2007, sequence version 2.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Cyclin-U3-1;
DE Short=CycU3;1;
DE AltName: Full=Cyclin-P1.1;
DE Short=CycP1;1;
GN Name=CYCU3-1; OrderedLocusNames=At3g63120; ORFNames=T20O10.220;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP TISSUE SPECIFICITY, AND INTERACTION WITH CDKA-1 AND CDKB1-1.
RX PubMed=15197472; DOI=10.1007/s00018-004-4057-4;
RA Torres Acosta J.A., de Almeida Engler J., Raes J., Magyar Z., de Groodt R.,
RA Inze D., de Veylder L.;
RT "Molecular characterization of Arabidopsis PHO80-like proteins, a novel
RT class of CDKA;1-interacting cyclins.";
RL Cell. Mol. Life Sci. 61:1485-1497(2004).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15208425; DOI=10.1104/pp.104.040436;
RA Wang G., Kong H., Sun Y., Zhang X., Zhang W., Altman N., dePamphilis C.W.,
RA Ma H.;
RT "Genome-wide analysis of the cyclin family in Arabidopsis and comparative
RT phylogenetic analysis of plant cyclin-like proteins.";
RL Plant Physiol. 135:1084-1099(2004).
CC -!- SUBUNIT: Interacts with CDKA-1 AND CDKB1-1.
CC {ECO:0000269|PubMed:15197472}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, stems and flowers. Expressed in
CC the shoot apex, leaf primordia and young leaves.
CC {ECO:0000269|PubMed:15197472}.
CC -!- SIMILARITY: Belongs to the cyclin family. Cyclin U/P subfamily.
CC {ECO:0000305}.
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DR EMBL; AL163816; CAB87757.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE80437.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64214.1; -; Genomic_DNA.
DR EMBL; AK176751; BAD44514.1; -; mRNA.
DR EMBL; AK222234; BAD95416.1; -; mRNA.
DR EMBL; AK230449; BAF02245.1; -; mRNA.
DR EMBL; AY087409; AAM64958.1; -; mRNA.
DR PIR; T48101; T48101.
DR RefSeq; NP_001326259.1; NM_001340191.1.
DR RefSeq; NP_191871.1; NM_116177.3.
DR AlphaFoldDB; Q8LB60; -.
DR SMR; Q8LB60; -.
DR BioGRID; 10801; 2.
DR IntAct; Q8LB60; 2.
DR STRING; 3702.AT3G63120.1; -.
DR PaxDb; Q8LB60; -.
DR PRIDE; Q8LB60; -.
DR DNASU; 825487; -.
DR EnsemblPlants; AT3G63120.1; AT3G63120.1; AT3G63120.
DR EnsemblPlants; AT3G63120.2; AT3G63120.2; AT3G63120.
DR GeneID; 825487; -.
DR Gramene; AT3G63120.1; AT3G63120.1; AT3G63120.
DR Gramene; AT3G63120.2; AT3G63120.2; AT3G63120.
DR KEGG; ath:AT3G63120; -.
DR Araport; AT3G63120; -.
DR TAIR; locus:2099192; AT3G63120.
DR eggNOG; KOG1674; Eukaryota.
DR HOGENOM; CLU_057371_0_0_1; -.
DR InParanoid; Q8LB60; -.
DR OMA; AHIYIDH; -.
DR OrthoDB; 1153955at2759; -.
DR PhylomeDB; Q8LB60; -.
DR PRO; PR:Q8LB60; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8LB60; baseline and differential.
DR Genevisible; Q8LB60; AT.
DR GO; GO:0019901; F:protein kinase binding; IEA:InterPro.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0000079; P:regulation of cyclin-dependent protein serine/threonine kinase activity; IEA:InterPro.
DR CDD; cd00043; CYCLIN; 1.
DR InterPro; IPR013763; Cyclin-like.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR012389; Cyclin_P/U.
DR InterPro; IPR013922; Cyclin_PHO80-like.
DR PANTHER; PTHR15615; PTHR15615; 1.
DR Pfam; PF08613; Cyclin; 1.
DR PIRSF; PIRSF027110; PREG; 1.
DR SUPFAM; SSF47954; SSF47954; 1.
PE 1: Evidence at protein level;
KW Cell cycle; Cell division; Cyclin; Reference proteome.
FT CHAIN 1..221
FT /note="Cyclin-U3-1"
FT /id="PRO_0000287071"
FT CONFLICT 186
FT /note="R -> S (in Ref. 4; AAM64958)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 221 AA; 25431 MW; B5A1FD031135BF4E CRC64;
MDSLATDPAF IDSDVYLRLG LIIEGKRLKK PPTVLSRLSS SLERSLLLNH DDKILLGSPD
SVTVFDGRSP PEISIAHYLD RIFKYSCCSP SCFVIAHIYI DHFLHKTRAL LKPLNVHRLI
ITTVMLAAKV FDDRYFNNAY YARVGGVTTR ELNRLEMELL FTLDFKLQVD PQTFHTHCCQ
LEKQNRDGFQ IEWPIKEACR ANKETWQKRT PDSLCSQTTA R
