CD033_MOUSE
ID CD033_MOUSE Reviewed; 192 AA.
AC Q8BGN2; Q8C8S9; Q9CZE4; Q9D5M7;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=UPF0462 protein C4orf33 homolog;
GN Name=D3Ertd751e;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=C57BL/6J; TISSUE=Corpora quadrigemina, Kidney, Retina, and Testis;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=C57BL/6J; TISSUE=Thymus;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q8BGN2-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8BGN2-2; Sequence=VSP_027013;
CC -!- SIMILARITY: Belongs to the UPF0462 family. {ECO:0000305}.
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DR EMBL; AK012700; BAB28420.1; -; mRNA.
DR EMBL; AK015146; BAB29724.1; -; mRNA.
DR EMBL; AK044548; BAC31974.1; -; mRNA.
DR EMBL; AK045813; BAC32501.1; -; mRNA.
DR EMBL; AK085404; BAC39441.1; -; mRNA.
DR EMBL; BC062244; AAH62244.1; -; mRNA.
DR CCDS; CCDS17332.1; -. [Q8BGN2-1]
DR CCDS; CCDS50900.1; -. [Q8BGN2-2]
DR RefSeq; NP_001093255.1; NM_001099785.1. [Q8BGN2-1]
DR RefSeq; NP_001277977.1; NM_001291048.1.
DR RefSeq; NP_081547.1; NM_027271.1. [Q8BGN2-2]
DR RefSeq; NP_082943.2; NM_028667.3. [Q8BGN2-1]
DR AlphaFoldDB; Q8BGN2; -.
DR SMR; Q8BGN2; -.
DR STRING; 10090.ENSMUSP00000119049; -.
DR PhosphoSitePlus; Q8BGN2; -.
DR MaxQB; Q8BGN2; -.
DR PaxDb; Q8BGN2; -.
DR PeptideAtlas; Q8BGN2; -.
DR PRIDE; Q8BGN2; -.
DR ProteomicsDB; 283737; -. [Q8BGN2-1]
DR ProteomicsDB; 283738; -. [Q8BGN2-2]
DR Antibodypedia; 27038; 88 antibodies from 19 providers.
DR DNASU; 73852; -.
DR Ensembl; ENSMUST00000026867; ENSMUSP00000026867; ENSMUSG00000025766. [Q8BGN2-2]
DR Ensembl; ENSMUST00000108065; ENSMUSP00000103700; ENSMUSG00000025766. [Q8BGN2-1]
DR Ensembl; ENSMUST00000146165; ENSMUSP00000119049; ENSMUSG00000025766. [Q8BGN2-1]
DR Ensembl; ENSMUST00000192193; ENSMUSP00000142092; ENSMUSG00000025766. [Q8BGN2-2]
DR Ensembl; ENSMUST00000194346; ENSMUSP00000141925; ENSMUSG00000025766. [Q8BGN2-1]
DR Ensembl; ENSMUST00000195882; ENSMUSP00000142037; ENSMUSG00000025766. [Q8BGN2-1]
DR GeneID; 73852; -.
DR KEGG; mmu:73852; -.
DR UCSC; uc008pcr.1; mouse. [Q8BGN2-1]
DR UCSC; uc008pct.1; mouse. [Q8BGN2-2]
DR CTD; 73852; -.
DR MGI; MGI:1289213; D3Ertd751e.
DR VEuPathDB; HostDB:ENSMUSG00000025766; -.
DR eggNOG; ENOG502R3ZD; Eukaryota.
DR GeneTree; ENSGT00390000006284; -.
DR HOGENOM; CLU_075391_1_0_1; -.
DR InParanoid; Q8BGN2; -.
DR OMA; NGLWDYE; -.
DR OrthoDB; 1462707at2759; -.
DR PhylomeDB; Q8BGN2; -.
DR TreeFam; TF313077; -.
DR BioGRID-ORCS; 73852; 1 hit in 71 CRISPR screens.
DR ChiTaRS; D3Ertd751e; mouse.
DR PRO; PR:Q8BGN2; -.
DR Proteomes; UP000000589; Chromosome 3.
DR RNAct; Q8BGN2; protein.
DR Bgee; ENSMUSG00000025766; Expressed in embryonic post-anal tail and 212 other tissues.
DR ExpressionAtlas; Q8BGN2; baseline and differential.
DR Genevisible; Q8BGN2; MM.
DR InterPro; IPR029674; C4orf33.
DR PANTHER; PTHR31475:SF3; PTHR31475:SF3; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..192
FT /note="UPF0462 protein C4orf33 homolog"
FT /id="PRO_0000295715"
FT VAR_SEQ 82..165
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:15489334,
FT ECO:0000303|PubMed:16141072"
FT /id="VSP_027013"
FT CONFLICT 175
FT /note="S -> I (in Ref. 1; BAB29724)"
FT /evidence="ECO:0000305"
FT CONFLICT 192
FT /note="W -> C (in Ref. 1; BAB28420)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 192 AA; 22460 MW; 83E1A6530B477C49 CRC64;
MDFKIEYTWD GFPVRHEPVC VRLSPCEQGV KMEVSAPLFN DPPSPLGEPG KPFSELWNYE
VVEAFFLNDT TKQYLEVELC PHGQHLVLLL AGRRNVWKKE LPLSFKASRG GTNWEGEAYI
PWSYFPPNVT KFNSFAIHGS NDRRVYEALY PVPQHELQQG QKPDFHRLEY FKPFSFNTLL
GEEWRQPEPD LW
