CD047_MOUSE
ID CD047_MOUSE Reviewed; 316 AA.
AC Q3U1D9;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=UPF0602 protein C4orf47 homolog;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=NOD;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, microtubule organizing
CC center, centrosome {ECO:0000250|UniProtKB:A7E2U8}.
CC -!- SIMILARITY: Belongs to the UPF0602 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC107256; AAI07257.1; -; mRNA.
DR EMBL; AK156041; BAE33559.1; -; mRNA.
DR CCDS; CCDS22283.1; -.
DR RefSeq; NP_001028320.1; NM_001033148.3.
DR RefSeq; XP_006509547.1; XM_006509484.3.
DR AlphaFoldDB; Q3U1D9; -.
DR STRING; 10090.ENSMUSP00000092961; -.
DR iPTMnet; Q3U1D9; -.
DR PhosphoSitePlus; Q3U1D9; -.
DR MaxQB; Q3U1D9; -.
DR PaxDb; Q3U1D9; -.
DR PRIDE; Q3U1D9; -.
DR Antibodypedia; 52303; 21 antibodies from 11 providers.
DR DNASU; 69479; -.
DR Ensembl; ENSMUST00000095323; ENSMUSP00000092961; ENSMUSG00000071103.
DR Ensembl; ENSMUST00000098786; ENSMUSP00000096383; ENSMUSG00000071103.
DR GeneID; 69479; -.
DR KEGG; mmu:69479; -.
DR UCSC; uc009lpn.1; mouse.
DR MGI; MGI:1916729; 1700029J07Rik.
DR VEuPathDB; HostDB:ENSMUSG00000071103; -.
DR eggNOG; ENOG502QVET; Eukaryota.
DR GeneTree; ENSGT00390000010980; -.
DR HOGENOM; CLU_078899_0_0_1; -.
DR InParanoid; Q3U1D9; -.
DR OMA; YMMEEAK; -.
DR OrthoDB; 1015843at2759; -.
DR PhylomeDB; Q3U1D9; -.
DR TreeFam; TF329198; -.
DR BioGRID-ORCS; 69479; 3 hits in 75 CRISPR screens.
DR PRO; PR:Q3U1D9; -.
DR Proteomes; UP000000589; Chromosome 8.
DR RNAct; Q3U1D9; protein.
DR Bgee; ENSMUSG00000071103; Expressed in spermatid and 117 other tissues.
DR ExpressionAtlas; Q3U1D9; baseline and differential.
DR Genevisible; Q3U1D9; MM.
DR GO; GO:0097731; C:9+0 non-motile cilium; ISO:MGI.
DR GO; GO:0005813; C:centrosome; ISS:UniProtKB.
DR GO; GO:0005881; C:cytoplasmic microtubule; ISO:MGI.
DR InterPro; IPR029358; DUF4586.
DR PANTHER; PTHR31144; PTHR31144; 1.
DR Pfam; PF15239; DUF4586; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Cytoskeleton; Reference proteome.
FT CHAIN 1..316
FT /note="UPF0602 protein C4orf47 homolog"
FT /id="PRO_0000341951"
FT REGION 220..242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 316 AA; 35260 MW; 9164E4EDBDA9B48B CRC64;
MPIEGGKTDM ERIGLFSEME YITVGDKYVS PFNRPFNEAA SKNRQILPGG TKEMSSLQAG
YFDSQFARIF EGEGYVNLNQ VRRRYMLAES KKNLGKAFIP SSGEKKPSGL GSYYGTIGGP
VPFFSAQIKP KDKYQPPGKN LYTNPGKKGT GYGYANVTIG KQLSHSSDLY DAARQSYKKE
SEEHHRLIKG SPFKLHLHPK DYFDTNPYFL EHHLPPLRRE EKKEVSFKPF KPSSPGKKAG
GMKAGAFDPY PAHSADPYVV KVEKAIPSKG ERVFHPPNGP KSRPVESIMA LNVKRALNVK
NYKNASSTTL GKQLVF
