CD1C1_CAVPO
ID CD1C1_CAVPO Reviewed; 332 AA.
AC Q9QZY8;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=T-cell surface glycoprotein CD1c1;
DE AltName: CD_antigen=CD1c-1;
DE Flags: Precursor;
GN Name=CD1C1;
OS Cavia porcellus (Guinea pig).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae;
OC Cavia.
OX NCBI_TaxID=10141;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=Hartley, and NIH 2; TISSUE=Thymus;
RX PubMed=10553074;
RA Dascher C.C., Hiromatsu K., Naylor J.W., Brauer P.P., Brown K.A.,
RA Storey J.R., Behar S.M., Kawasaki E.S., Porcelli S.A., Brenner M.B.,
RA LeClair K.P.;
RT "Conservation of a CD1 multigene family in the guinea pig.";
RL J. Immunol. 163:5478-5488(1999).
CC -!- FUNCTION: Antigen-presenting protein that binds self and non-self lipid
CC and glycolipid antigens and presents them to T-cell receptors on
CC natural killer T-cells. {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer with B2M (beta-2-microglobulin). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass type I
CC membrane protein {ECO:0000250}. Endosome membrane {ECO:0000250}.
CC Note=Subject to intracellular trafficking between the cell membrane and
CC endosomes. {ECO:0000250}.
CC -!- MISCELLANEOUS: During protein synthesis and maturation, CD1 family
CC members bind endogenous lipids that are replaced by lipid or glycolipid
CC antigens when the proteins are internalized and pass through endosomes
CC or lysosomes, before trafficking back to the cell surface.
CC {ECO:0000250}.
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DR EMBL; AF145487; AAF12742.1; -; mRNA.
DR RefSeq; NP_001166324.1; NM_001172853.1.
DR AlphaFoldDB; Q9QZY8; -.
DR SMR; Q9QZY8; -.
DR STRING; 10141.ENSCPOP00000006870; -.
DR GeneID; 100379553; -.
DR KEGG; cpoc:100379553; -.
DR CTD; 100379553; -.
DR eggNOG; ENOG502SJH6; Eukaryota.
DR InParanoid; Q9QZY8; -.
DR OrthoDB; 827472at2759; -.
DR Proteomes; UP000005447; Unassembled WGS sequence.
DR GO; GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0002250; P:adaptive immune response; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR Gene3D; 3.30.500.10; -; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR011161; MHC_I-like_Ag-recog.
DR InterPro; IPR037055; MHC_I-like_Ag-recog_sf.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF16497; MHC_I_3; 1.
DR SMART; SM00407; IGc1; 1.
DR SUPFAM; SSF48726; SSF48726; 1.
DR SUPFAM; SSF54452; SSF54452; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
PE 2: Evidence at transcript level;
KW Adaptive immunity; Cell membrane; Disulfide bond; Endosome; Glycoprotein;
KW Immunity; Immunoglobulin domain; Membrane; Reference proteome; Signal;
KW Transmembrane; Transmembrane helix.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..332
FT /note="T-cell surface glycoprotein CD1c1"
FT /id="PRO_0000014587"
FT TOPO_DOM 18..300
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 301..321
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 322..332
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 205..292
FT /note="Ig-like"
FT CARBOHYD 25
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 38
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 75
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 146
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 120..184
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 224..279
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 332 AA; 37905 MW; F28D2F62F9DEDAB0 CRC64;
MLFLHFLFLD VVLGGSITEN VVQENISFYV MQISSYANKS WVQNHGSGWL DELQTHGWDS
ESDKIIFLHT WSRGNFSNEE LEDLQLLFHA YFSGLALRIQ HQPSQLEVKY PFEVQARAGC
ELHSGEHTKG FIHAAVNGLN FLSYQNKSLV PSPEGGTRAQ KFCDLFNTYE GIRETVYYLI
RDTCPRFLLG LLDAGKMDLQ RQVRPEVWLS SSPNLEPGRL LLACHVSGFY PKPIWVMWMR
GAQEQLETKQ GDILPHADGT WYLRVTLDVA AREAAGLSCR VRHSSLRDQD IILYWGHGLS
VILITFAVIV PLVLLIVLML LYKKRCTYQG IQ